| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_159012g0010 |
| Family | GT51 |
| Protein Properties | Length: 741 Molecular Weight: 81648.2 Isoelectric Point: 9.4145 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT51 | 58 | 236 | 0 |
| DGSLLGEYSKERRLYLPIQAIPKPVINAFLAAEDKNFYEHGGIDFTGMARAAVLYAQNYGSNRRPQGASTITQQVAKNFLLTNEVSFNRKIKEALLAMRI ERTYTKDKILELYLNEIYLGLSAYGIAAASLVYFDKSVNELTIAEAAYLAALPKAPSSLHPVRNRDRAIERRNYVIDRL | |||
| Full Sequence |
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| Protein Sequence Length: 741 Download |
| MRLLLRFMGF LFAAGTIVFL VGVAAVAGAI WHFSKDLPDY SQLQDYEPAV MTRVHAADGS 60 LLGEYSKERR LYLPIQAIPK PVINAFLAAE DKNFYEHGGI DFTGMARAAV LYAQNYGSNR 120 RPQGASTITQ QVAKNFLLTN EVSFNRKIKE ALLAMRIERT YTKDKILELY LNEIYLGLSA 180 YGIAAASLVY FDKSVNELTI AEAAYLAALP KAPSSLHPVR NRDRAIERRN YVIDRLAENG 240 WIKQADAVAA RKEPLVVTSR SNAAHIFAGE YFAEEVRRDI FERYGEKKLY EGGLSVRTSL 300 DPKLQIMARK AMVAGLVKFD EAQGWRGAPH KIDLGGDWGV KLAEVKSLSD ISPWRMAVVL 360 ETSDQSARIG FQPGRELGGA ISKTRETGLI SLEGVRWAKA AAGPTRFKTP TAVTQVLAPG 420 DAVYVDPLLD KDGNKVEGQY RLRQIPEVSG AMVAMDPWTG RVVAMVGGFS FDQSQFNRAT 480 QAYRQPGSSF KPIVYSTAMD NGYTPSTVVV DAPIEIDQGQ GAGVWRPENY STGKYYGPTT 540 LRNALIRSLN TVTVRLAQDV GMPLIGEYAK RFGIYDELPN YLSYALGAGE TTVMRMVTAY 600 SMFANGGKRV KPTLIDRIQD RYGHTIFKHD QRECRGCDAG DVWKNQPEPS LVDRREQVLD 660 SMTAYQITSM MEGVVQSGTA TVLREVGKPI AGKTGTTNDE KDAWFIGFSP DLVVGVYIGY 720 DKPRNLGRGG TGGHLAAPVV K |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02074 | PBP_1a_fam | 3.0e-83 | 69 | 324 | 256 | + penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. | ||
| COG0744 | MrcB | 2.0e-83 | 425 | 739 | 317 | + Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane] | ||
| TIGR02074 | PBP_1a_fam | 6.0e-111 | 447 | 739 | 293 | + penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. | ||
| PRK11636 | mrcA | 9.0e-151 | 37 | 733 | 756 | + penicillin-binding protein 1a; Provisional | ||
| COG5009 | MrcA | 0 | 16 | 739 | 727 | + Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_947794.1 | 0 | 34 | 741 | 34 | 741 | penicillin-binding protein 1A [Rhodopseudomonas palustris CGA009] |
| RefSeq | YP_486620.1 | 0 | 1 | 741 | 1 | 741 | penicillin-binding protein 1A [Rhodopseudomonas palustris HaA2] |
| RefSeq | YP_532719.1 | 0 | 34 | 741 | 34 | 741 | penicillin-binding protein 1A [Rhodopseudomonas palustris BisB18] |
| RefSeq | YP_569575.1 | 0 | 1 | 741 | 1 | 741 | penicillin-binding protein 1A [Rhodopseudomonas palustris BisB5] |
| RefSeq | YP_781894.1 | 0 | 1 | 741 | 1 | 741 | 1A family penicillin-binding protein [Rhodopseudomonas palustris BisA53] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ue1_B | 0 | 53 | 739 | 22 | 707 | A Chain A, Crystal Structure Of Lpxc From Pseudomonas Aeruginosa Complexed With The Potent Bb-78485 Inhibitor |
| PDB | 3ue1_A | 0 | 53 | 739 | 22 | 707 | A Chain A, Crystal Structure Of Lpxc From Pseudomonas Aeruginosa Complexed With The Potent Bb-78485 Inhibitor |
| PDB | 3ue0_B | 0 | 53 | 739 | 22 | 707 | A Chain A, Crystal Structure Of Lpxc From Pseudomonas Aeruginosa Complexed With The Potent Bb-78485 Inhibitor |
| PDB | 3ue0_A | 0 | 53 | 739 | 22 | 707 | A Chain A, Crystal Structure Of Lpxc From Pseudomonas Aeruginosa Complexed With The Potent Bb-78485 Inhibitor |
| PDB | 3udx_B | 0 | 53 | 739 | 22 | 707 | A Chain A, Crystal Structure Of Lpxc From Pseudomonas Aeruginosa Complexed With The Potent Bb-78485 Inhibitor |
| Transmembrane Domains | ||||
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| Start | End | |||
| 7 | 29 | |||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JK727499 | 222 | 32 | 253 | 0 |
| CF567768 | 236 | 386 | 619 | 2e-39 |
| GW430459 | 166 | 409 | 574 | 2e-37 |
| HO417631 | 213 | 533 | 739 | 2e-36 |
| HO417631 | 94 | 425 | 517 | 2e-36 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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