PlantCAZyme

Basic Information
Species	Picea abies
Cazyme ID	MA_159111g0370
Family	GH17
Protein Properties	Length: 559 Molecular Weight: 61389.4 Isoelectric Point: 9.9442
View CDS

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
GH17	233	328	3.1e-24
HVDVIRKRMAVAFPNKEILIGETGWPSAGRMREGALPSRANQARVVSEILQLARQEKFRVNLIEAYDQPWKRMWEGTVGGHWGLFDAAGSRDLKYP

Full Sequence
Protein Sequence Length: 559 Download
MALXPARTGY RRASWRTEPI SLRTPLALLV ISLSAIAAIW WWLATPIVLA RAPIDPAAKL 60 ECVSYAPFRD GQNPLQPGLV ISPEQMTQDL AQLAKVTDCV RTYSVGNGLD RVPELAEKAG 120 LKVMLGIWIG TNRIDNRAQI ETAIALAKKY PGVISAVIVG NEVLLRGEMT AADLTANIRY 180 VKSKVGAIQV TYADVWEFWL KNRDVYDAVD FVTIHILPYW EDFPIRARHA ANHVDVIRKR 240 MAVAFPNKEI LIGETGWPSA GRMREGALPS RANQARVVSE ILQLARQEKF RVNLIEAYDQ 300 PWKRMWEGTV GGHWGLFDAA GSRDLKYPAG EPITNFPRAK IYAGAGMIFS ALVFGVALLT 360 LRRRPWSPHL SSWVTVAICA TAGGALLGVA YDKLIVESLG IGGWTVGILL FGAAVLSPLV 420 VANTVMYGRS LPTFMELVGP REYRTGSRMQ TILGIVLLIT TVLATQTALG FVFDPRYRDF 480 QFAALTMAVV PFVLLTALNR PAKGTRPITE SVFAGALALS AVYIGFNEGP ANWQSLWTCG 540 LYLLLALTLS RARVAQIQE

Full Sequence

Protein Sequence Length: 559 Download

MALXPARTGY RRASWRTEPI SLRTPLALLV ISLSAIAAIW WWLATPIVLA RAPIDPAAKL    60
ECVSYAPFRD GQNPLQPGLV ISPEQMTQDL AQLAKVTDCV RTYSVGNGLD RVPELAEKAG    120
LKVMLGIWIG TNRIDNRAQI ETAIALAKKY PGVISAVIVG NEVLLRGEMT AADLTANIRY    180
VKSKVGAIQV TYADVWEFWL KNRDVYDAVD FVTIHILPYW EDFPIRARHA ANHVDVIRKR    240
MAVAFPNKEI LIGETGWPSA GRMREGALPS RANQARVVSE ILQLARQEKF RVNLIEAYDQ    300
PWKRMWEGTV GGHWGLFDAA GSRDLKYPAG EPITNFPRAK IYAGAGMIFS ALVFGVALLT    360
LRRRPWSPHL SSWVTVAICA TAGGALLGVA YDKLIVESLG IGGWTVGILL FGAAVLSPLV    420
VANTVMYGRS LPTFMELVGP REYRTGSRMQ TILGIVLLIT TVLATQTALG FVFDPRYRDF    480
QFAALTMAVV PFVLLTALNR PAKGTRPITE SVFAGALALS AVYIGFNEGP ANWQSLWTCG    540
LYLLLALTLS RARVAQIQE 

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
pfam00332	Glyco_hydro_17	0.008	246	328	86	+ Glycosyl hydrolases family 17.
COG5309	COG5309	7.0e-49	64	319	264	+ Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism]

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
RefSeq	YP_318400.1	0	51	558	26	531	putative beta (1-6) glucans synthase [Nitrobacter winogradskyi Nb-255]
RefSeq	YP_486471.1	0	7	557	8	556	putative beta (1-6) glucans synthase [Rhodopseudomonas palustris HaA2]
RefSeq	YP_532471.1	0	55	556	39	538	putative beta (1-6) glucans synthase [Rhodopseudomonas palustris BisB18]
RefSeq	ZP_01047440.1	0	49	559	56	564	putative beta (1-6) glucans synthase [Nitrobacter sp. Nb-311A]
RefSeq	ZP_06360275.1	0	51	556	30	533	putative beta (1-6) glucans synthase, NdvC-like protein [Rhodopseudomonas palustris DX-1]

Transmembrane Domains

Start	End
20	42
341	362
369	391
401	423
451	470
480	499

EST Download unfiltered results here

Hit	Length	Start	End	EValue
GO554455	190	155	344	0
HO411541	311	47	333	3e-19
EV245189	202	76	264	0.00000000000001
EV245724	202	76	264	0.0000000000001
EV244433	200	76	262	0.0000000000001

Orthologous Group
Species	ID
Picea abies	MA_159111g0350.51.304
Ricinus communis	58058.m000013

CAZyme Information