| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000295938 |
| Family | CBM43 |
| Protein Properties | Length: 478 Molecular Weight: 51499.1 Isoelectric Point: 5.3902 |
| Chromosome | Chromosome/Scaffold: 014113373 Start: 4363 End: 7000 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 357 | 439 | 1.1e-23 |
| WCVMSPSASLDDPEVALSVSYACSKADCTSLGYGTSCGDLDARGNISYAFNSYYQINNQLDTACKFPNLSTVATSDPSTGNCK | |||
| GH17 | 29 | 335 | 0 |
| IGANWGTQLTHPLPPATVVKMLKXNGIQKVKLFDADSGILNALSKSGIQVMVGIPNEMLYSLANSMQAAEKWVSKNVSSHVSNGVDIRYAAVGNEPLLST YNGTFLPTIFPALQNIQSALIKAGVSNQDSGGSDLPSNGDFRPDTKDLMLEIVKFLSDNGAAFTVNIYPFISLYNDANFPADYAFFNGYSGAINDNGRIY NNVFDANHDTLVWALQKNGFGNLSIIIGEIGWPTDGNLNANMQNAQRFNQGFMSHIKNNAGTPMRAGPVDAYLFSLIDEDAKSIQPGNFERHWGLFYWDG TPKYQLS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 478 Download |
| MGLLKGVGFR GLSVALLFFN LLVGLVVGIG ANWGTQLTHP LPPATVVKML KXNGIQKVKL 60 FDADSGILNA LSKSGIQVMV GIPNEMLYSL ANSMQAAEKW VSKNVSSHVS NGVDIRYAAV 120 GNEPLLSTYN GTFLPTIFPA LQNIQSALIK AGVSNQDSGG SDLPSNGDFR PDTKDLMLEI 180 VKFLSDNGAA FTVNIYPFIS LYNDANFPAD YAFFNGYSGA INDNGRIYNN VFDANHDTLV 240 WALQKNGFGN LSIIIGEIGW PTDGNLNANM QNAQRFNQGF MSHIKNNAGT PMRAGPVDAY 300 LFSLIDEDAK SIQPGNFERH WGLFYWDGTP KYQLSLGTTG SNGLVAASGV QYLEKKWCVM 360 SPSASLDDPE VALSVSYACS KADCTSLGYG TSCGDLDARG NISYAFNSYY QINNQLDTAC 420 KFPNLSTVAT SDPSTGNCKF RIMIRASSSS SENSGAGSLE KPSCLGMVFV FMFLYTIL 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 8.0e-5 | 249 | 327 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 9.0e-14 | 356 | 427 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 6.0e-27 | 356 | 440 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-70 | 42 | 335 | 306 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI38945.1 | 0 | 19 | 478 | 14 | 483 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273826.1 | 0 | 3 | 478 | 79 | 565 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324127.1 | 0 | 26 | 472 | 38 | 498 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330836.1 | 0 | 7 | 475 | 20 | 497 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528007.1 | 0 | 26 | 478 | 26 | 490 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 46 | 336 | 20 | 314 | A Chain A, Cpgh89 (E483q, E601q), From Clostridium Perfringens, In Complex With Its Substrate Glcnac-Alpha-1,4-Galactose |
| PDB | 3ur8_A | 0 | 46 | 336 | 20 | 314 | A Chain A, Cpgh89 (E483q, E601q), From Clostridium Perfringens, In Complex With Its Substrate Glcnac-Alpha-1,4-Galactose |
| PDB | 3ur7_B | 0 | 46 | 336 | 20 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 46 | 336 | 20 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 0 | 46 | 336 | 20 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
