Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00002686m |
Family | GT90 |
Protein Properties | Length: 303 Molecular Weight: 34305.9 Isoelectric Point: 5.8745 |
Chromosome | Chromosome/Scaffold: 034526 Start: 5825 End: 7004 |
Description | Arabidopsis thaliana protein of unknown function (DUF821) |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT90 | 7 | 255 | 0 |
RVPDVDLMFDCMDRPAVNRTEHGAGDPAAPPPPPLFRYCTTRDHFDIPFPDWSFWGWPETNIEPWSREFKSIKVGAKATKWVDRVPTAFWKGNPDVASPL RLALLGCNDTNLWRAEIMRQNWTDEANAGYQHSKLSTQCTHRYKIYAEGFAWSVSLKYILSCGSMALLIEPQYEDFFSRGLEPRVNHWPVSRGPGMCDSI RDAVDWGNANPAEAERVGRRGQRLMQDLRMAAIYDYKLHLLTEYAALMD |
Full Sequence |
---|
Protein Sequence Length: 303 Download |
MRRHPGRVPD VDLMFDCMDR PAVNRTEHGA GDPAAPPPPP LFRYCTTRDH FDIPFPDWSF 60 WGWPETNIEP WSREFKSIKV GAKATKWVDR VPTAFWKGNP DVASPLRLAL LGCNDTNLWR 120 AEIMRQNWTD EANAGYQHSK LSTQCTHRYK IYAEGFAWSV SLKYILSCGS MALLIEPQYE 180 DFFSRGLEPR VNHWPVSRGP GMCDSIRDAV DWGNANPAEA ERVGRRGQRL MQDLRMAAIY 240 DYKLHLLTEY AALMDFRPAP PPTAQEACEA SVLCLADDKQ RHFLEASAAE PAAEEPCVLP 300 PE* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05686 | Glyco_transf_90 | 2.0e-14 | 213 | 284 | 73 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
pfam05686 | Glyco_transf_90 | 3.0e-42 | 2 | 112 | 111 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
smart00672 | CAP10 | 2.0e-89 | 7 | 256 | 259 | + Putative lipopolysaccharide-modifying enzyme. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF85344.1 | 0 | 1 | 301 | 135 | 434 | unknown [Zea mays] |
GenBank | ACF87853.1 | 0 | 1 | 301 | 180 | 479 | unknown [Zea mays] |
RefSeq | NP_001054658.1 | 0 | 42 | 302 | 26 | 293 | Os05g0149500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151574.1 | 0 | 1 | 301 | 180 | 479 | lipopolysaccharide-modifying protein [Zea mays] |
RefSeq | XP_002439287.1 | 0 | 1 | 299 | 186 | 492 | hypothetical protein SORBIDRAFT_09g003810 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
FL750643 | 190 | 95 | 284 | 0 |
FL799000 | 182 | 103 | 284 | 0 |
DY233055 | 208 | 80 | 284 | 0 |
DR831026 | 204 | 84 | 284 | 0 |
DR694795 | 266 | 19 | 284 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|