| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00002879m |
| Family | AA1 |
| Protein Properties | Length: 335 Molecular Weight: 36134.3 Isoelectric Point: 8.3378 |
| Chromosome | Chromosome/Scaffold: 0339487 Start: 238 End: 1314 |
| Description | laccase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 1 | 325 | 0 |
| KIAGHSFTVVGADASYTTPYETDVVVVSPGQTVDALMVAGARASRRYYMVASPYNSAHPDVPFREGAATAVVEYAAAGGPRKARRPPLLAPMPPFNDTAT AHRFFTSLTALLRPGHPTVPLAVDTRMFVTVGLGLAACRPEQTRCMQQGVAASMNNASFELPTAMSLLEAHFRNVTAGVYTRDFPDQPPMEFNYAKPPSS MDATTAKSTKVRTVRYNATVEVVLQNTGLLARESHPMHLHGHNFFVLAQGFGNFRRDAAVARYNLVNPQERNTLAVPPGGWAVIRFVANNPGMWIMHCHF DAHLPIGLAMAFEVLDGPTPETALP | |||
| Full Sequence |
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| Protein Sequence Length: 335 Download |
| KIAGHSFTVV GADASYTTPY ETDVVVVSPG QTVDALMVAG ARASRRYYMV ASPYNSAHPD 60 VPFREGAATA VVEYAAAGGP RKARRPPLLA PMPPFNDTAT AHRFFTSLTA LLRPGHPTVP 120 LAVDTRMFVT VGLGLAACRP EQTRCMQQGV AASMNNASFE LPTAMSLLEA HFRNVTAGVY 180 TRDFPDQPPM EFNYAKPPSS MDATTAKSTK VRTVRYNATV EVVLQNTGLL ARESHPMHLH 240 GHNFFVLAQG FGNFRRDAAV ARYNLVNPQE RNTLAVPPGG WAVIRFVANN PGMWIMHCHF 300 DAHLPIGLAM AFEVLDGPTP ETALPPPPAD LPQC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02191 | PLN02191 | 9.0e-34 | 2 | 312 | 315 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 8.0e-37 | 1 | 313 | 322 | + oxidoreductase | ||
| pfam07731 | Cu-oxidase_2 | 9.0e-39 | 183 | 317 | 140 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03388 | ascorbase | 1.0e-46 | 2 | 313 | 315 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 1.0e-104 | 1 | 317 | 321 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA97328.1 | 0 | 1 | 334 | 318 | 657 | laccase family protein, putative [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC78752.1 | 0 | 1 | 334 | 237 | 576 | hypothetical protein OsI_18967 [Oryza sativa Indica Group] |
| GenBank | EEE62822.1 | 0 | 1 | 334 | 237 | 543 | hypothetical protein OsJ_17625 [Oryza sativa Japonica Group] |
| RefSeq | NP_001066518.1 | 0 | 1 | 334 | 237 | 576 | Os12g0259800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002442097.1 | 0 | 1 | 334 | 241 | 576 | hypothetical protein SORBIDRAFT_08g011530 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 1e-32 | 2 | 312 | 231 | 521 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 1asq_A | 1e-32 | 2 | 312 | 231 | 521 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 1asp_B | 1e-32 | 2 | 312 | 231 | 521 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EG377960 | 208 | 115 | 317 | 0 |
| EG384947 | 231 | 95 | 317 | 0 |
| EG383867 | 205 | 121 | 317 | 0 |
| DY941206 | 296 | 1 | 290 | 0 |
| DY943744 | 229 | 95 | 317 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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