| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00014086m |
| Family | AA1 |
| Protein Properties | Length: 396 Molecular Weight: 43859.8 Isoelectric Point: 10.8832 |
| Chromosome | Chromosome/Scaffold: 0183846 Start: 54 End: 1413 |
| Description | laccase 14 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| AA1 | 1 | 363 | 0 |
| ITETNVTRLCHEKTILTVNGQFPGPTIHARKGDVVFVNVHNRARKNITLHWHGVDQPRNRWFDGPEFITQCPIRPGAKFTYRIVFSDEEGTVWWHAHSDF DRATVHGAIIVSPKLGAAYPYPEPHRDIPIILGEWWNVNVQHMLEETMQSGGDFEISDANTINGQPGDLFPCSKKGTFRVPVERGRTYMLRVINAGLSND MFFAVAGHNLTVVGSDGHYLKPFTVGHIMILAGQTMDVLLHADRAGNASRYYMAARTARTLLGAKIEVTINNRSTAPPRPSSSTRTPLRRPPPRGRRRPS PTCRPSATSTRRRRTRRGSACGANETCKGPINGTRFAASLNNVSFVAPAVNILDAYYYSSSSV | |||
| Full Sequence |
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| Protein Sequence Length: 396 Download |
| ITETNVTRLC HEKTILTVNG QFPGPTIHAR KGDVVFVNVH NRARKNITLH WHGVDQPRNR 60 WFDGPEFITQ CPIRPGAKFT YRIVFSDEEG TVWWHAHSDF DRATVHGAII VSPKLGAAYP 120 YPEPHRDIPI ILGEWWNVNV QHMLEETMQS GGDFEISDAN TINGQPGDLF PCSKKGTFRV 180 PVERGRTYML RVINAGLSND MFFAVAGHNL TVVGSDGHYL KPFTVGHIMI LAGQTMDVLL 240 HADRAGNASR YYMAARTART LLGAKIEVTI NNRSTAPPRP SSSTRTPLRR PPPRGRRRPS 300 PTCRPSATST RRRRTRRGSA CGANETCKGP INGTRFAASL NNVSFVAPAV NILDAYYYSS 360 SSVRVRARLP RQAAAGLQLH RARPGAGALV HEAGHQ |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03389 | laccase | 1.0e-5 | 323 | 353 | 31 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| PLN02604 | PLN02604 | 7.0e-45 | 10 | 254 | 275 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 9.0e-47 | 10 | 252 | 271 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| pfam07732 | Cu-oxidase_3 | 1.0e-47 | 1 | 114 | 116 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03389 | laccase | 1.0e-136 | 1 | 264 | 264 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001068513.1 | 0 | 1 | 386 | 40 | 456 | Os11g0696900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001105915.1 | 0 | 1 | 363 | 44 | 428 | putative laccase [Zea mays] |
| Swiss-Prot | Q6Z8L2 | 0 | 1 | 375 | 37 | 438 | LAC9_ORYSJ RecName: Full=Putative laccase-9; AltName: Full=Benzenediol:oxygen oxidoreductase 9; AltName: Full=Urishiol oxidase 9; AltName: Full=Diphenol oxidase 9; Flags: Precursor |
| RefSeq | XP_002452548.1 | 0 | 1 | 363 | 52 | 434 | hypothetical protein SORBIDRAFT_04g027860 [Sorghum bicolor] |
| RefSeq | XP_002452900.1 | 0 | 1 | 363 | 41 | 422 | hypothetical protein SORBIDRAFT_04g034610 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 2e-34 | 10 | 259 | 19 | 283 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
| PDB | 1asq_A | 2e-34 | 10 | 259 | 19 | 283 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
| PDB | 1asp_B | 2e-34 | 10 | 259 | 19 | 283 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
| PDB | 1asp_A | 2e-34 | 10 | 259 | 19 | 283 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
| PDB | 1aso_B | 2e-34 | 10 | 259 | 19 | 283 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EE185313 | 254 | 6 | 256 | 0 |
| EB664311 | 217 | 46 | 262 | 0 |
| CA275768 | 226 | 1 | 226 | 0 |
| CA275767 | 206 | 1 | 206 | 0 |
| DV486906 | 212 | 1 | 212 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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