| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00016961m |
| Family | GT41 |
| Protein Properties | Length: 369 Molecular Weight: 42166.3 Isoelectric Point: 6.1842 |
| Chromosome | Chromosome/Scaffold: 063619 Start: 162 End: 3233 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT41 | 147 | 348 | 0 |
| PHKRSDYGLPEDKFIFACFNQLYKMDPEIFDTWCNILKRVPNSALWLLRFPAAGETRVRSHAAARGVRPDQIIFTDVAMKNEHIRRSQLADLFLDTPLCN AHTTGTDILWAGLPMITLPLEKMATRVAGSLCVATGLGEEMIVSSMKEYEERAVELALNPAKLQSLTNKLKEVRMSCPLFDTARWVRNLERAYYKMWNLY CS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 369 Download |
| MGSVFGMHDR DNIEVFCYAL SQNDGTEWRQ RIQSEAEHFV DVSAMTSDMI ARLINQDKIQ 60 ILINLNGYTK GARNEIFALQ PAPIQVSYMG FPGTTGAAYI DYLVTDEFVS PSCYAHIYSE 120 KLVHLPHCYF VNDYKQKNQD CLTPVCPHKR SDYGLPEDKF IFACFNQLYK MDPEIFDTWC 180 NILKRVPNSA LWLLRFPAAG ETRVRSHAAA RGVRPDQIIF TDVAMKNEHI RRSQLADLFL 240 DTPLCNAHTT GTDILWAGLP MITLPLEKMA TRVAGSLCVA TGLGEEMIVS SMKEYEERAV 300 ELALNPAKLQ SLTNKLKEVR MSCPLFDTAR WVRNLERAYY KMWNLYCSGR HPEPFKVEED 360 DKEFPFDR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13844 | Glyco_transf_41 | 8.0e-60 | 1 | 136 | 137 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
| pfam13844 | Glyco_transf_41 | 1.0e-80 | 150 | 343 | 194 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
| COG3914 | Spy | 4.0e-97 | 1 | 346 | 348 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN26645.1 | 0 | 1 | 368 | 642 | 1009 | unknown [Zea mays] |
| GenBank | EEC73199.1 | 0 | 1 | 368 | 635 | 1004 | hypothetical protein OsI_07263 [Oryza sativa Indica Group] |
| GenBank | EEE57013.1 | 0 | 1 | 368 | 635 | 1004 | hypothetical protein OsJ_06783 [Oryza sativa Japonica Group] |
| RefSeq | XP_002270163.1 | 0 | 1 | 368 | 619 | 986 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002453843.1 | 0 | 1 | 368 | 644 | 1011 | hypothetical protein SORBIDRAFT_04g019560 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4gz6_D | 0 | 150 | 353 | 514 | 716 | X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase |
| PDB | 4gz6_D | 2.99878e-43 | 1 | 134 | 256 | 390 | X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase |
| PDB | 4gz6_C | 0 | 150 | 353 | 514 | 716 | X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase |
| PDB | 4gz6_C | 2.99878e-43 | 1 | 134 | 256 | 390 | X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase |
| PDB | 4gz6_B | 0 | 150 | 353 | 514 | 716 | X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| HO778725 | 369 | 1 | 369 | 0 |
| HO795247 | 369 | 1 | 369 | 0 |
| GT034150 | 327 | 16 | 342 | 0 |
| GO881553 | 311 | 1 | 311 | 0 |
| GO881553 | 26 | 305 | 330 | 0.00005 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |