Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00025430m |
Family | GT31 |
Protein Properties | Length: 111 Molecular Weight: 12511.3 Isoelectric Point: 7.9796 |
Chromosome | Chromosome/Scaffold: 0239467 Start: 64 End: 1929 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 2 | 92 | 1.8e-23 |
LETHWDKPRVYIGCMKSGEVFSDSTHKWYEPDWWKFGDGKSYFRHASGEMFVISRAVAQFISINRSVLRTYAHDDVSVGSWMIGLAVKHVN |
Full Sequence |
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Protein Sequence Length: 111 Download |
MLETHWDKPR VYIGCMKSGE VFSDSTHKWY EPDWWKFGDG KSYFRHASGE MFVISRAVAQ 60 FISINRSVLR TYAHDDVSVG SWMIGLAVKH VNEAKLCCSS WPSGAMCSAL * 120 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01762 | Galactosyl_T | 1.0e-16 | 7 | 92 | 88 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03193 | PLN03193 | 2.0e-36 | 2 | 102 | 102 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE68617.1 | 0 | 1 | 110 | 234 | 343 | hypothetical protein OsJ_27160 [Oryza sativa Japonica Group] |
RefSeq | NP_001061709.1 | 0 | 1 | 110 | 234 | 343 | Os08g0386700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001136971.1 | 0 | 1 | 110 | 113 | 222 | hypothetical protein LOC100217131 [Zea mays] |
RefSeq | NP_001149441.1 | 0 | 1 | 110 | 237 | 346 | beta-1,3-galactosyltransferase sqv-2 [Zea mays] |
RefSeq | XP_002444279.1 | 0 | 1 | 110 | 237 | 346 | hypothetical protein SORBIDRAFT_07g019420 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL918076 | 111 | 1 | 111 | 0 |
JG883289 | 111 | 1 | 111 | 0 |
JG961049 | 111 | 1 | 111 | 0 |
CJ663002 | 111 | 1 | 111 | 0 |
EB514564 | 111 | 1 | 111 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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