Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00027797m |
Family | GT34 |
Protein Properties | Length: 356 Molecular Weight: 39792.7 Isoelectric Point: 7.3054 |
Chromosome | Chromosome/Scaffold: 0349629 Start: 4 End: 1133 |
Description | Galactosyl transferase GMA12/MNN10 family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT34 | 155 | 303 | 2.6e-23 |
WSLDLMDAWAAMGPDSPDYRRWGTVLKSTFGDKVFDESDDQSALVYMLLQSGSPWREKVFLESDYYFEGYWLEIVGRLGNITERYEAMERRPGSAALRRR RAEVEHAARAAARNAALAGAGLAEAGVNGWRRPFVTHFTGCQPCSGQRN | |||
GT34 | 46 | 148 | 9.80909e-45 |
ERVLMVSGSQPAPCGAPGGDHTLTRLLKNKVDYCRLHGVQLLYNTALLRPSMDRYWAKIPAIRAAMVAHPEAEWVWWVDSDAVLTDMDFRPPLRRYRGHN LVV |
Full Sequence |
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Protein Sequence Length: 356 Download |
SSAGSGGRTF YDDPALAYTV DRPIAGWDEK RAGWARAHPE LSRGGERVLM VSGSQPAPCG 60 APGGDHTLTR LLKNKVDYCR LHGVQLLYNT ALLRPSMDRY WAKIPAIRAA MVAHPEAEWV 120 WWVDSDAVLT DMDFRPPLRR YRGHNLVVHG WPRLWSLDLM DAWAAMGPDS PDYRRWGTVL 180 KSTFGDKVFD ESDDQSALVY MLLQSGSPWR EKVFLESDYY FEGYWLEIVG RLGNITERYE 240 AMERRPGSAA LRRRRAEVEH AARAAARNAA LAGAGLAEAG VNGWRRPFVT HFTGCQPCSG 300 QRNEHYTGAS CDEGMRRALN FADDQVLRAY GFRHAGPLSD DVQPLPFDYP ATASQ* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05637 | Glyco_transf_34 | 1.0e-43 | 46 | 300 | 301 | + galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34. | ||
PLN03182 | PLN03182 | 2.0e-113 | 13 | 344 | 356 | + xyloglucan 6-xylosyltransferase; Provisional | ||
PLN03181 | PLN03181 | 0 | 4 | 353 | 373 | + glycosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0016021 | integral to membrane |
GO:0016758 | transferase activity, transferring hexosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN80825.1 | 0 | 9 | 351 | 86 | 446 | hypothetical protein [Vitis vinifera] |
GenBank | EAY87343.1 | 0 | 6 | 354 | 54 | 422 | hypothetical protein OsI_08746 [Oryza sativa Indica Group] |
RefSeq | NP_001047970.1 | 0 | 6 | 354 | 79 | 447 | Os02g0723200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001105164.1 | 0 | 9 | 353 | 74 | 441 | alpha-6-galactosyltransferase [Zea mays] |
RefSeq | XP_002454367.1 | 0 | 8 | 353 | 68 | 440 | hypothetical protein SORBIDRAFT_04g029500 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xyloglucan biosynthesis | RXN-12415 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
xyloglucan biosynthesis | RXN-9461 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CD437628 | 235 | 9 | 220 | 0 |
CD437366 | 247 | 128 | 353 | 0 |
EY148072 | 251 | 9 | 237 | 0 |
DR971088 | 197 | 9 | 182 | 0 |
CV058639 | 197 | 69 | 242 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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