| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00029923m |
| Family | CE16 |
| Protein Properties | Length: 399 Molecular Weight: 42899.5 Isoelectric Point: 7.9377 |
| Chromosome | Chromosome/Scaffold: 007251 Start: 321 End: 3235 |
| Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE16 | 50 | 375 | 1.6e-21 |
| FGDSNSDTGGLSSLFGAAPAPNGRTFFGRPAGRYCDGRLVIDFIAESLGIPYLSAYLNSIGSNFTQGANFATAGSSIRRQNTSLFLSGFSPISLDVQSWE FEQFINRSEYVYNNKGGIYRELLPRAEYFSQALYTFDIGQNDITSSYFVNNTTAEVEATIPDLMERLTSVMQSVYARGGRYFWIHNTGPLGCLPYALLHR PDLAAPVDGAGCSVTYNKVAQHFNLRLKETVASLRKAHPDAAFTYVDVYTAKYKLISEAKKLGFDDPLLTCCGHGGRYNFDLNIGCGGKKQVNGTWMMGN SCEDPSKRVSWDGVHFTEAANKFVFD | |||
| Full Sequence |
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| Protein Sequence Length: 399 Download |
| MATATAATGA ARTAALLLLP LVLALALAPR ASGAAAAGGG DCHFPAIFNF GDSNSDTGGL 60 SSLFGAAPAP NGRTFFGRPA GRYCDGRLVI DFIAESLGIP YLSAYLNSIG SNFTQGANFA 120 TAGSSIRRQN TSLFLSGFSP ISLDVQSWEF EQFINRSEYV YNNKGGIYRE LLPRAEYFSQ 180 ALYTFDIGQN DITSSYFVNN TTAEVEATIP DLMERLTSVM QSVYARGGRY FWIHNTGPLG 240 CLPYALLHRP DLAAPVDGAG CSVTYNKVAQ HFNLRLKETV ASLRKAHPDA AFTYVDVYTA 300 KYKLISEAKK LGFDDPLLTC CGHGGRYNFD LNIGCGGKKQ VNGTWMMGNS CEDPSKRVSW 360 DGVHFTEAAN KFVFDQIVAG ALSDPPVPLK RACQSKGR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3240 | COG3240 | 0.004 | 50 | 379 | 342 | + Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | ||
| pfam00657 | Lipase_GDSL | 2.0e-20 | 47 | 377 | 337 | + GDSL-like Lipase/Acylhydrolase. | ||
| cd01846 | fatty_acyltransferase_like | 1.0e-25 | 50 | 379 | 331 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
| PLN03156 | PLN03156 | 5.0e-34 | 44 | 383 | 353 | + GDSL esterase/lipase; Provisional | ||
| cd01837 | SGNH_plant_lipase_like | 2.0e-113 | 45 | 380 | 342 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006629 | lipid metabolic process |
| GO:0016788 | hydrolase activity, acting on ester bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF87430.1 | 0 | 36 | 398 | 32 | 396 | unknown [Zea mays] |
| GenBank | ACG38411.1 | 0 | 41 | 398 | 37 | 396 | alpha-L-fucosidase 2 precursor [Zea mays] |
| GenBank | EAZ04511.1 | 0 | 41 | 398 | 31 | 391 | hypothetical protein OsI_26662 [Oryza sativa Indica Group] |
| RefSeq | NP_001105800.1 | 0 | 36 | 398 | 30 | 394 | hypothetical protein LOC606473 [Zea mays] |
| RefSeq | XP_002463099.1 | 0 | 39 | 398 | 37 | 398 | hypothetical protein SORBIDRAFT_02g037820 [Sorghum bicolor] |
