Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00039825m |
Family | GH100 |
Protein Properties | Length: 470 Molecular Weight: 53566.7 Isoelectric Point: 5.8795 |
Chromosome | Chromosome/Scaffold: 058371 Start: 402 End: 5223 |
Description | alkaline/neutral invertase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH100 | 1 | 446 | 0 |
MVYYCGSPVGTIAANDPNDSDPVNYDQVFIRDFIPSGIAFLLKGEYEIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTIPLDGDEDATEEVLDP DFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERIDVQTGMKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLCAREML TPEDGSADLIRALNNRLIALSFHIREYYWLDMQKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEWIPPKGGYFIGNLQPAHMDFRFFSLGNLWSIVS SLATTHQSHAILDLIESKWSDLVAEMPLKICYPALENQEWKIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRPELAAKAIEIAERRIATDKWPEY YDTKRARFIGKQSRLYQTWSIAGFLVAKLLMEKPDAARILWNDEDA |
Full Sequence |
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Protein Sequence Length: 470 Download |
MVYYCGSPVG TIAANDPNDS DPVNYDQVFI RDFIPSGIAF LLKGEYEIVR NFILHTLQLQ 60 SWEKTMDCHS PGQGLMPASF KVRTIPLDGD EDATEEVLDP DFGEAAIGRV APVDSGLWWI 120 ILLRAYGKCS GDLSVQERID VQTGMKMILK LCLADGFDMF PTLLVTDGSC MIDRRMGIHG 180 HPLEIQALFY SALLCAREML TPEDGSADLI RALNNRLIAL SFHIREYYWL DMQKLNEIYR 240 YKTEEYSYDA VNKFNIYPDQ IPPWLVEWIP PKGGYFIGNL QPAHMDFRFF SLGNLWSIVS 300 SLATTHQSHA ILDLIESKWS DLVAEMPLKI CYPALENQEW KIITGSDPKN TPWSYHNGGS 360 WPTLLWQLTV ACIKMNRPEL AAKAIEIAER RIATDKWPEY YDTKRARFIG KQSRLYQTWS 420 IAGFLVAKLL MEKPDAARIL WNDEDAKILN ALSTNRKRGK KVLKKTYIV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 0.008 | 29 | 213 | 198 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
PLN02703 | PLN02703 | 0 | 1 | 469 | 475 | + beta-fructofuranosidase | ||
pfam12899 | Glyco_hydro_100 | 0 | 1 | 434 | 434 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
PLN03005 | PLN03005 | 0 | 1 | 448 | 448 | + beta-fructofuranosidase | ||
PLN02973 | PLN02973 | 0 | 1 | 448 | 448 | + beta-fructofuranosidase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF84899.1 | 0 | 1 | 469 | 133 | 601 | unknown [Zea mays] |
GenBank | EAY86114.1 | 0 | 1 | 469 | 138 | 624 | hypothetical protein OsI_07486 [Oryza sativa Indica Group] |
RefSeq | NP_001047012.1 | 0 | 1 | 469 | 138 | 606 | Os02g0529400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001142296.1 | 0 | 1 | 469 | 133 | 601 | hypothetical protein LOC100274465 [Zea mays] |
RefSeq | XP_002452195.1 | 0 | 1 | 469 | 135 | 603 | hypothetical protein SORBIDRAFT_04g021550 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO811217 | 477 | 1 | 470 | 0 |
HO779905 | 406 | 68 | 470 | 0 |
GO872629 | 324 | 1 | 324 | 0 |
GO845848 | 314 | 16 | 329 | 0 |
GO845848 | 20 | 329 | 348 | 0.16 |
Sequence Alignments (This image is cropped. Click for full image.) |
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