| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00058326m |
| Family | GH95 |
| Protein Properties | Length: 404 Molecular Weight: 44332.9 Isoelectric Point: 5.0826 |
| Chromosome | Chromosome/Scaffold: 019965 Start: 3204 End: 6377 |
| Description | 1,2-alpha-L-fucosidases |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH95 | 1 | 385 | 0 |
| DTLWTGAPGNYTDPEAPAALAVVRELVNQGRFADATEAARRLFGGQSEVSLQYGFVLVSLGAVSTHNAYDSYKRELDLHTATVLVTYNIGEVRYMREHFC SNPHQVIVTMISANIPGQVSCTMSLSSRLKNNVTVTNANELVMEGICPSQRPSLRKGNSNDVTGIKFAAVVGLQIGGNTGKATVVNDQQLRLDNADWVVL VVAASSSFNGPFVNPADSKLDPTSIALNTLNLTRNLTYDQLKAAHLDDYQHLFYRLTIQLSRGLKDTHSLSTEKDRLNEEVGGEIRTSADRVKSFSIDED PSLVELLFQYGRYLLISCSRPGTQVSNLQGIWNQEVAPAWDAAPHLNINLQMNYWPALPCNLSECQEPLFDFLASLAVNGSKTAK | |||
| Full Sequence |
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| Protein Sequence Length: 404 Download |
| DTLWTGAPGN YTDPEAPAAL AVVRELVNQG RFADATEAAR RLFGGQSEVS LQYGFVLVSL 60 GAVSTHNAYD SYKRELDLHT ATVLVTYNIG EVRYMREHFC SNPHQVIVTM ISANIPGQVS 120 CTMSLSSRLK NNVTVTNANE LVMEGICPSQ RPSLRKGNSN DVTGIKFAAV VGLQIGGNTG 180 KATVVNDQQL RLDNADWVVL VVAASSSFNG PFVNPADSKL DPTSIALNTL NLTRNLTYDQ 240 LKAAHLDDYQ HLFYRLTIQL SRGLKDTHSL STEKDRLNEE VGGEIRTSAD RVKSFSIDED 300 PSLVELLFQY GRYLLISCSR PGTQVSNLQG IWNQEVAPAW DAAPHLNINL QMNYWPALPC 360 NLSECQEPLF DFLASLAVNG SKTAKMDPQE VYHQWDEVVG VNP* |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABG66022.1 | 0 | 1 | 389 | 62 | 441 | large secreted protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ABG66023.1 | 0 | 68 | 389 | 20 | 334 | large secreted protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC79728.1 | 0 | 1 | 389 | 62 | 441 | hypothetical protein OsI_21058 [Oryza sativa Indica Group] |
| RefSeq | NP_001064381.1 | 0 | 1 | 387 | 75 | 479 | Os10g0339600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002461732.1 | 0 | 1 | 389 | 88 | 505 | hypothetical protein SORBIDRAFT_02g007180 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2rdy_B | 0 | 1 | 387 | 43 | 412 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2rdy_A | 0 | 1 | 387 | 43 | 412 | A Chain A, Crystal Structure Of A Putative Glycoside Hydrolase Family Protein From Bacillus Halodurans |
| PDB | 2eae_A | 1e-31 | 1 | 386 | 76 | 460 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complexes With Products |
| PDB | 2ead_B | 1e-31 | 1 | 386 | 77 | 461 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
| PDB | 2ead_A | 1e-31 | 1 | 386 | 77 | 461 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CB634370 | 248 | 68 | 315 | 0 |
| JG393075 | 259 | 135 | 387 | 0 |
| HO164980 | 219 | 164 | 382 | 0 |
| DN551718 | 286 | 86 | 357 | 0 |
| DY275135 | 362 | 1 | 360 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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