| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s145_119V6.1 |
| Family | GH17 |
| Protein Properties | Length: 502 Molecular Weight: 54183.1 Isoelectric Point: 6.1743 |
| Chromosome | Chromosome/Scaffold: 145 Start: 814463 End: 817682 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH17 | 61 | 381 | 0 |
| LGINYRTLGDNLPSPTDAVAAIKTMKFGRVKIFNPNEKILTALANTGIEVVVAVPNEQIVEVGASPSAANAWVQQHVAAYYPATIIVVILVGNEIFTGTI FQSTWTSLVPAIQNLHAALESLGWSGQIKISTAVALDVLTSSFPPSAGSFRSDIATHIIQPLLTFLTTTSSYLFVNVYPFLTCSSSSDISLSYAMFANST NDVVDGVLTYTNLMDAQLDAVYAASFKLGFASLRIAVGETGWPTAGDPTQVHAPIDNAAVYNRRLVRKALSTTQIGTPSRPGFIIPSYIFALFNENLKPG AGSERNWGLLYPNLSQVYALD | |||
| Full Sequence |
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| Protein Sequence Length: 502 Download |
| MGSQLGKTPT NSENFMNFMM REKTISPRFS RLNTPREIEV GEFVADSVQI GGGYAQQFRT 60 LGINYRTLGD NLPSPTDAVA AIKTMKFGRV KIFNPNEKIL TALANTGIEV VVAVPNEQIV 120 EVGASPSAAN AWVQQHVAAY YPATIIVVIL VGNEIFTGTI FQSTWTSLVP AIQNLHAALE 180 SLGWSGQIKI STAVALDVLT SSFPPSAGSF RSDIATHIIQ PLLTFLTTTS SYLFVNVYPF 240 LTCSSSSDIS LSYAMFANST NDVVDGVLTY TNLMDAQLDA VYAASFKLGF ASLRIAVGET 300 GWPTAGDPTQ VHAPIDNAAV YNRRLVRKAL STTQIGTPSR PGFIIPSYIF ALFNENLKPG 360 AGSERNWGLL YPNLSQVYAL DLTGQLSDSQ NSPSSDSSPL VSGSDAEFCA AIQPGQSCYL 420 PNTLVRHADW AFNSYWQKYK GAGASCSFDG AGVLTSTDPR EWRSTSGGIT ETKAQFQTPA 480 ELERNHDMRC RSSRHEVGVK N* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 3.0e-9 | 409 | 453 | 50 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 8.0e-22 | 409 | 459 | 51 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-93 | 61 | 381 | 322 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001759996.1 | 0 | 55 | 393 | 1 | 338 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001777261.1 | 0 | 59 | 461 | 4 | 445 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001779924.1 | 0 | 47 | 393 | 28 | 373 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001781801.1 | 0 | 61 | 494 | 1 | 449 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001784285.1 | 0 | 61 | 459 | 1 | 428 | predicted protein [Physcomitrella patens subsp. patens] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 61 | 382 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 61 | 383 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 61 | 383 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 61 | 383 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 61 | 383 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DR023094 | 285 | 73 | 354 | 0 |
| DV981805 | 288 | 70 | 354 | 0 |
| CO480976 | 285 | 59 | 340 | 0 |
| DY302831 | 296 | 91 | 382 | 0 |
| FC340651 | 202 | 183 | 383 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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