| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s154_32V6.1 |
| Family | GH63 |
| Protein Properties | Length: 478 Molecular Weight: 53344.4 Isoelectric Point: 4.7359 |
| Chromosome | Chromosome/Scaffold: 154 Start: 211520 End: 214518 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH63 | 45 | 468 | 0 |
| CQSYAYKKLQTLLSDSREILIDNDQGGYTIPAKGLYPYQWNWDSALVAMGWATLDEARAWEEMTKLFSAQWDDGMVSHIVFHKPSTTYFPGPEIWGSVEK PRKSTGITQPPVAAITVRNLFEQAVNKELALTKVRELFPKLLSWHRWFKTARDPENTGLVATLHPWESGMDNSPAWDEPLRNVPVDDIPPYVRADLTHVN SSMRPSQAEYDRFLTLVYRFRAVDYDCNQLYYLSPFRVTDLCTNSVLYRANLSLRWLAELLGELDVLPEIDGWLESTRAAFSSLYDPEAKMFKSKDQLTG KLLNASTSAGFLPLFARIATPTQAQELAGTLERWLSCVKYGIPSNDPESADFEALRYWRGPIWAIVNWMITDGLRAYGFDSLAQRVESDTYELLGSGIYE YYDPTDGKPAGGGSFSWTAAMCLA | |||
| Full Sequence |
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| Protein Sequence Length: 478 Download |
| MAPVAMLSTI PATEAPARPG CGGALDYSTP AAVPGAKRAD LTDECQSYAY KKLQTLLSDS 60 REILIDNDQG GYTIPAKGLY PYQWNWDSAL VAMGWATLDE ARAWEEMTKL FSAQWDDGMV 120 SHIVFHKPST TYFPGPEIWG SVEKPRKSTG ITQPPVAAIT VRNLFEQAVN KELALTKVRE 180 LFPKLLSWHR WFKTARDPEN TGLVATLHPW ESGMDNSPAW DEPLRNVPVD DIPPYVRADL 240 THVNSSMRPS QAEYDRFLTL VYRFRAVDYD CNQLYYLSPF RVTDLCTNSV LYRANLSLRW 300 LAELLGELDV LPEIDGWLES TRAAFSSLYD PEAKMFKSKD QLTGKLLNAS TSAGFLPLFA 360 RIATPTQAQE LAGTLERWLS CVKYGIPSND PESADFEALR YWRGPIWAIV NWMITDGLRA 420 YGFDSLAQRV ESDTYELLGS GIYEYYDPTD GKPAGGGSFS WTAAMCLAWL SKAVPSS* 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1626 | TreA | 5.0e-5 | 254 | 462 | 238 | + Neutral trehalase [Carbohydrate transport and metabolism] | ||
| pfam03200 | Glyco_hydro_63 | 9.0e-6 | 151 | 463 | 364 | + Mannosyl oligosaccharide glucosidase. This is a family of eukaryotic enzymes belonging to glycosyl hydrolase family 63. They catalyze the specific cleavage of the non-reducing terminal glucose residue from Glc(3)Man(9)GlcNAc(2). Mannosyl oligosaccharide glucosidase EC:3.2.1.106 is the first enzyme in the N-linked oligosaccharide processing pathway. | ||
| PRK13270 | treF | 3.0e-6 | 288 | 462 | 191 | + trehalase; Provisional | ||
| pfam01204 | Trehalase | 2.0e-6 | 328 | 472 | 166 | + Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi. | ||
| COG3408 | GDB1 | 2.0e-6 | 287 | 465 | 189 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004555 | alpha,alpha-trehalase activity |
| GO:0005991 | trehalose metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001761811.1 | 0 | 56 | 472 | 93 | 511 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001772747.1 | 0 | 1 | 477 | 1 | 477 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001785177.1 | 0 | 37 | 477 | 28 | 468 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | YP_004589.1 | 0 | 62 | 469 | 5 | 413 | hypothetical protein TTC0614 [Thermus thermophilus HB27] |
| RefSeq | YP_144244.1 | 0 | 53 | 469 | 1 | 418 | hypothetical protein TTHA0978 [Thermus thermophilus HB8] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2z07_B | 0 | 53 | 469 | 1 | 418 | A Chain A, Crystal Structure Of Uncharacterized Conserved Protein From Thermus Thermophilus Hb8 |
| PDB | 2z07_A | 0 | 53 | 469 | 1 | 418 | A Chain A, Crystal Structure Of Uncharacterized Conserved Protein From Thermus Thermophilus Hb8 |
| PDB | 4j5t_A | 0.00009 | 73 | 466 | 381 | 797 | A Chain A, Crystal Structure Of Processing Alpha-glucosidase I |
| PDB | 3d3i_B | 0.003 | 354 | 464 | 632 | 748 | A Chain A, Crystal Structural Of Escherichia Coli K12 Ygjk, A Glucosidase Belonging To Glycoside Hydrolase Family 63 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FC358017 | 271 | 118 | 388 | 0 |
| FC350475 | 261 | 108 | 368 | 0 |
| DC936612 | 258 | 191 | 448 | 0 |
| BJ969620 | 232 | 49 | 280 | 0 |
| BJ969620 | 16 | 279 | 294 | 5.1 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Chlamydomonas reinhardtii | Cre10.g447550.t1.3 | ||||
| Physcomitrella patens | Pp1s448_1V6.1 | Pp1s51_76V6.1 | |||
| Selaginella moellendorffii | 437793 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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