Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s19_295V6.1 |
Family | GH27 |
Protein Properties | Length: 457 Molecular Weight: 50651.3 Isoelectric Point: 5.0596 |
Chromosome | Chromosome/Scaffold: 19 Start: 2119302 End: 2124286 |
Description | Melibiase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 281 | 377 | 1.3e-28 |
YAAPGGWNDPDMLEVGNGGMTVEEYRSHFSLWALMKAPLLIGCDVRNIGAEILEILANEEVIAVNQDPLGVQGKRVRMDGFSGLEVWSGPLSSGRVV | |||
GH27 | 77 | 178 | 8.2e-33 |
LDNGLASTPPMGWNSWNHFACNVNETVIFETADALVSTGLAAKGYKYINLDDCWAALQRDSQGNLLARATTFPSGIKALADYVHSKGLKLGIYSDAGYYT CA | |||
GH27 | 172 | 271 | 2e-33 |
AGYYTCASQPGSLGHETQDAQTFASWEIDYLKYDNCFTDGTKPEYRYPVMRDALNKTGRPIFFSMCEWGIDSPATWANNVGNSWRTTGDITDDWNSMVGI |
Full Sequence |
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Protein Sequence Length: 457 Download |
MGRRSTAELG DRMTKNVVVA MANLRLVFGL LSSVLLVVSC VEDRHTALRS PQTPRRQFPE 60 GVPSSVAPLV SRHQLRLDNG LASTPPMGWN SWNHFACNVN ETVIFETADA LVSTGLAAKG 120 YKYINLDDCW AALQRDSQGN LLARATTFPS GIKALADYVH SKGLKLGIYS DAGYYTCASQ 180 PGSLGHETQD AQTFASWEID YLKYDNCFTD GTKPEYRYPV MRDALNKTGR PIFFSMCEWG 240 IDSPATWANN VGNSWRTTGD ITDDWNSMVG IVELNNVWAD YAAPGGWNDP DMLEVGNGGM 300 TVEEYRSHFS LWALMKAPLL IGCDVRNIGA EILEILANEE VIAVNQDPLG VQGKRVRMDG 360 FSGLEVWSGP LSSGRVVLLL WNRSSESANI TARWSDMGIP NDTLLTVRDL WKHETISEAE 420 MYEICQEVPS HGVKMFILTP VSQIYLKRES YSHKMD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03231 | PLN03231 | 4.0e-25 | 85 | 350 | 355 | + putative alpha-galactosidase; Provisional | ||
pfam02065 | Melibiase | 1.0e-28 | 83 | 322 | 308 | + Melibiase. | ||
PLN02808 | PLN02808 | 0 | 77 | 440 | 365 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 0 | 74 | 442 | 370 | + alpha-galactosidase | ||
PLN02692 | PLN02692 | 0 | 77 | 442 | 367 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABC88435.1 | 0 | 70 | 440 | 53 | 420 | acid alpha galactosidase 2 [Cucumis sativus] |
DDBJ | BAC66445.1 | 0 | 70 | 440 | 59 | 427 | alpha-galactosidase [Helianthus annuus] |
EMBL | CAB87430.1 | 0 | 24 | 440 | 9 | 426 | alpha-galactosidase-like protein [Arabidopsis thaliana] |
RefSeq | XP_001755838.1 | 0 | 87 | 456 | 11 | 402 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002525666.1 | 0 | 64 | 441 | 38 | 414 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 77 | 440 | 1 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 78 | 436 | 2 | 388 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 77 | 440 | 1 | 386 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 77 | 440 | 1 | 386 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3lrl_A | 0 | 79 | 387 | 24 | 366 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |