CAZyme Information

Basic Information
SpeciesPhyscomitrella patens
Cazyme IDPp1s5078_1V6.1
FamilyGH25
Protein PropertiesLength: 185 Molecular Weight: 20454.9 Isoelectric Point: 5.2798
ChromosomeChromosome/Scaffold: 5078 Start: 112 End: 666
Description
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH25101041.1e-25
  AFKLPFVLDIETKEGQTRARISQIVNTWGTQFKQRTGRTLMIYTFPSFIDSYLDSSLGSYPLWYAYYSSGTPANKAGWKAWEFIQYTNKGKVPGI
Full Sequence
Protein Sequence     Length: 185     Download
VIESAGGLSA FKLPFVLDIE TKEGQTRARI SQIVNTWGTQ FKQRTGRTLM IYTFPSFIDS    60
YLDSSLGSYP LWYAYYSSGT PANKAGWKAW EFIQYTNKGK VPGISGDVDL NEYKGSEAEL    120
MAAYSNPTPN TSETAPQWKE SGRQWLIDQV GISSDWKAED PVDIGTLGSI LLKYTQNVLG    180
KKQS* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd06412GH25_CH-type9.0e-182120129+
pfam01183Glyco_hydro_258.0e-184104103+
cd06525GH25_Lyc-like3.0e-2413113101+
cd06524GH25_YegX-like1.0e-2413115106+
cd00599GH25_muramidase3.0e-2613113103+
Gene Ontology
GO TermDescription
GO:0003796lysozyme activity
GO:0009253peptidoglycan catabolic process
GO:0016998cell wall macromolecule catabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBA18122.12e-20212890226putative glycoside hydrolase [Paenibacillus phage phiBP]
RefSeqXP_001786760.1011841184predicted protein [Physcomitrella patens subsp. patens]
RefSeqYP_694826.12e-18714290227glycosy hydrolase family protein [Clostridium perfringens ATCC 13124]
RefSeqZP_02630442.12e-18711490197glycosyl hydrolase, family 25 [Clostridium perfringens E str. JGS1987]
RefSeqZP_02863939.12e-18714290227glycosyl hydrolase, family 25 [Clostridium perfringens C str. JGS1495]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1jfx_A0.0000000000000091312693215A Chain A, Crystal Structure Of The Bacterial Lysozyme From Streptomyces Coelicolor At 1.65 A Resolution
PDB2wag_A0.000513120100213A Chain A, The Structure Of A Family 25 Glycosyl Hydrolase From Bacillus Anthracis
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CA760394116131200.024
HO5171751101992.6
CI5402593367998.3
Orthologous Group
SpeciesID
Selaginella moellendorffii9823698567
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny