Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb03g030990.1 |
Family | GT43 |
Protein Properties | Length: 449 Molecular Weight: 50884.2 Isoelectric Point: 7.4051 |
Chromosome | Chromosome/Scaffold: 3 Start: 59300166 End: 59303564 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 216 | 424 | 0 |
LAHVLKNVPPPLLWIVAEWPYQSRETAEILRSSGVMYRHLICNRNSTNIRKIIVCQKNNAIFHIKKHRLDGIVHFADEERVYSVDLFEDMRKIRRFGTWP VATHVGARYKVILEGPVCRGNQVIGWHTNQRRGVPRRFPIGFSGFAFNSTILWDPQRWNSPTLESIILHSGGRGGLQESRFIEKLVEDETQMEGLTDNCT RVMVWNFDL |
Full Sequence |
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Protein Sequence Length: 449 Download |
MARRNAGAMQ REGSAGSVKD WSEFDPSPSP KLAYSQSYVA MRGLLTSVAS LDPVLMSSSL 60 KSLWAALSSH RHARSLERPK YKGVNWKRPM FHLLVCFLVG VFIGFTPLFS LDLSNNIDSE 120 NETLPFDGDV VDRQMLELKS TKLEPFVAAA ESEATEEQLV DESPPVPAML DDEADFIEAS 180 HVQPSANDSD FVARKQLIIV TTTSVRPHQA YYLNRLAHVL KNVPPPLLWI VAEWPYQSRE 240 TAEILRSSGV MYRHLICNRN STNIRKIIVC QKNNAIFHIK KHRLDGIVHF ADEERVYSVD 300 LFEDMRKIRR FGTWPVATHV GARYKVILEG PVCRGNQVIG WHTNQRRGVP RRFPIGFSGF 360 AFNSTILWDP QRWNSPTLES IILHSGGRGG LQESRFIEKL VEDETQMEGL TDNCTRVMVW 420 NFDLEPPQLN YPTGWLLQKN LDIIVPIT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03360 | Glyco_transf_43 | 4.0e-56 | 216 | 420 | 214 | + Glycosyltransferase family 43. | ||
PLN02458 | PLN02458 | 3.0e-77 | 75 | 434 | 370 | + transferase, transferring glycosyl groups | ||
cd00218 | GlcAT-I | 8.0e-92 | 197 | 426 | 236 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAI93179.1 | 0 | 2 | 448 | 4 | 448 | glycosyltransferase [Saccharum officinarum] |
GenBank | EAY75350.1 | 0 | 1 | 448 | 1 | 446 | hypothetical protein OsI_03246 [Oryza sativa Indica Group] |
RefSeq | NP_001043846.1 | 0 | 1 | 448 | 1 | 446 | Os01g0675500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151473.1 | 0 | 1 | 448 | 1 | 448 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 [Zea mays] |
RefSeq | XP_002458309.1 | 0 | 1 | 448 | 1 | 448 | hypothetical protein SORBIDRAFT_03g030990 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v84_B | 5e-22 | 199 | 429 | 7 | 238 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1v84_A | 5e-22 | 199 | 429 | 7 | 238 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1v83_B | 5e-22 | 199 | 429 | 7 | 238 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1v83_A | 5e-22 | 199 | 429 | 7 | 238 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1v82_B | 5e-22 | 199 | 429 | 7 | 238 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |