| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si006287m |
| Family | GH35 |
| Protein Properties | Length: 502 Molecular Weight: 54477.8 Isoelectric Point: 7.785 |
| Chromosome | Chromosome/Scaffold: 4 Start: 35604624 End: 35607474 |
| Description | beta-galactosidase 5 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 22 | 116 | 6.2e-40 |
| SNSKPTMWTEAWSGWFTAFGKPVPHRPVEDLAFAVARFIQKGGSFVNYYMYHGGTNFDRTSGGPFIATSYDYDAPIDEYGLLRQPKWGHLRDLHK | |||
| Full Sequence |
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| Protein Sequence Length: 502 Download |
| MVMDFQINTC NGFYCDYFTP NSNSKPTMWT EAWSGWFTAF GKPVPHRPVE DLAFAVARFI 60 QKGGSFVNYY MYHGGTNFDR TSGGPFIATS YDYDAPIDEY GLLRQPKWGH LRDLHKAIKQ 120 AEPALVSGDP TVQSIGNYEK AYVFKSSGGA CAAFLSNYKT NAPATVVFNG RRYELPAWSI 180 SVLPDCKTAV FNTATVKEPS APATMSPAGG FSWRSYSEAT NSLDDRAFTK DGLVEQLSMT 240 WDKSDYLWYT TYVNIDSSEQ FLKSGKWPQL TIYSAGHALQ VFVNGQSYGT AYGGYDSPKL 300 TYSGYVKMWQ GSNKISILSA AVGLPNQGTH YETWNVGVLG PVTLSGLNEG KRDLSNQKWT 360 YQIGLHGESL GVHTAAGSSS VEWGGAAGNQ PLTWHRAYFN APAGGAPVAL DLGSMGKGQA 420 WVNGHHIGRY WSYKAAGGGG CGGCGYAGTY SETKCQSGCG DISQRYYHVP RSWLNPSGNL 480 VVLLEEFGGN LSGVTLVTRT A* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-47 | 4 | 118 | 126 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 4 | 500 | 502 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG30563.1 | 0 | 4 | 501 | 226 | 723 | beta-galactosidase precursor [Zea mays] |
| GenBank | EAZ01416.1 | 0 | 4 | 500 | 222 | 716 | hypothetical protein OsI_23450 [Oryza sativa Indica Group] |
| RefSeq | NP_001057920.1 | 0 | 4 | 500 | 220 | 714 | Os06g0573600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130532.1 | 0 | 4 | 501 | 226 | 722 | hypothetical protein LOC100191631 [Zea mays] |
| RefSeq | XP_002437187.1 | 0 | 4 | 500 | 229 | 724 | hypothetical protein SORBIDRAFT_10g022620 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4e8d_B | 0.0000000008 | 16 | 101 | 223 | 313 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
| PDB | 4e8d_A | 0.0000000008 | 16 | 101 | 223 | 313 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
| PDB | 4e8c_B | 0.0000000008 | 16 | 101 | 223 | 313 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778160 | 504 | 4 | 500 | 0 |
| HO780602 | 509 | 4 | 500 | 0 |
| CD439620 | 289 | 189 | 477 | 0 |
| CO452768 | 263 | 46 | 308 | 0 |
| HO795552 | 416 | 4 | 414 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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