Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si013637m |
Family | CBM43 |
Protein Properties | Length: 492 Molecular Weight: 52760.3 Isoelectric Point: 5.6738 |
Chromosome | Chromosome/Scaffold: 6 Start: 18259256 End: 18263893 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 367 | 446 | 1.1e-24 |
WCVANPGQNLNNVGNHLKLACTMADCTTLYYGGLCNAIGDKGNISYAFNIYYQLQKQDAKSCDFDGLGMITYLDPSIGEC | |||
GH17 | 26 | 346 | 0 |
VGVNWGTVSAHRMPPPVVVDLLRANGIAKVKLFDADPAVLRALAGSGVQVMVGIRNEALAGIAASPAAADAWVAQNVSRYVAARGGVDIRYIAVGNEPFL TSYQGQFQSYVLPAVTNIQQSLVKANLASYIKLVVPCNADAYQSASVPSQGVFRPDLTQIMTQLAAFLSTTGAPFMVNIYPFLSLYQNSDFPQDYAFFDG SSHPVVDGPNVYYNAFDGNFDTLISSLSKIGYGQLPIAIGEVGWPTEGATTANLATARAFNQGLISHVLSNKGTPLRPGVPPTDVYLFSLLDEEQKSILP GNFERHWGIFSFDGQAKYPLN |
Full Sequence |
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Protein Sequence Length: 492 Download |
MAAAVTMLVA AALLLALLPR AADAAVGVNW GTVSAHRMPP PVVVDLLRAN GIAKVKLFDA 60 DPAVLRALAG SGVQVMVGIR NEALAGIAAS PAAADAWVAQ NVSRYVAARG GVDIRYIAVG 120 NEPFLTSYQG QFQSYVLPAV TNIQQSLVKA NLASYIKLVV PCNADAYQSA SVPSQGVFRP 180 DLTQIMTQLA AFLSTTGAPF MVNIYPFLSL YQNSDFPQDY AFFDGSSHPV VDGPNVYYNA 240 FDGNFDTLIS SLSKIGYGQL PIAIGEVGWP TEGATTANLA TARAFNQGLI SHVLSNKGTP 300 LRPGVPPTDV YLFSLLDEEQ KSILPGNFER HWGIFSFDGQ AKYPLNLGLG SPVLKNARDV 360 PYLPPQWCVA NPGQNLNNVG NHLKLACTMA DCTTLYYGGL CNAIGDKGNI SYAFNIYYQL 420 QKQDAKSCDF DGLGMITYLD PSIGECRFLV GIDDRRVLAR SSYSDSSSPV SCGLWLMTIW 480 VFVWFTIVGS F* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0001 | 171 | 338 | 183 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-15 | 366 | 435 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-29 | 366 | 448 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 6.0e-70 | 27 | 346 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF23465.2 | 0 | 26 | 467 | 106 | 546 | Os08g0326500 [Oryza sativa Japonica Group] |
GenBank | EAZ06546.1 | 0 | 26 | 467 | 36 | 476 | hypothetical protein OsI_28792 [Oryza sativa Indica Group] |
RefSeq | NP_001061551.1 | 0 | 26 | 467 | 36 | 476 | Os08g0326500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001141759.1 | 0 | 18 | 490 | 20 | 491 | hypothetical protein LOC100273895 [Zea mays] |
RefSeq | XP_002459936.1 | 0 | 22 | 490 | 24 | 491 | hypothetical protein SORBIDRAFT_02g017290 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 26 | 347 | 1 | 306 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1aq0_B | 0 | 26 | 347 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 26 | 347 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3f55_D | 0 | 26 | 347 | 2 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3f55_C | 0 | 26 | 347 | 2 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |