| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si015679m |
| Family | CBM43 |
| Protein Properties | Length: 491 Molecular Weight: 51190.7 Isoelectric Point: 7.7199 |
| Chromosome | Chromosome/Scaffold: 6 Start: 33452395 End: 33454110 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 397 | 484 | 7.4e-30 |
| WCVLASGEGKAANETAVQAALEYACQQGSGTCAAIQPGGACHEPDTLDAHASYAFNSYWQQFRNAGGTCFFNGLAEATTKDPSHGSCK | |||
| GH17 | 50 | 372 | 0 |
| LGVNYGTVADDLPSAARSVQLLRAAGAGAVKIYDANPDILRALAGTGLPVAVMVPNEAIPSLASSRAAAEGWVAANLAPHVPAARVMYLLVGNEVLSNRA AAGSTWRAIVPAMANLHRALRAHGIRKVKLGTTLAMDALSASYPPSAGAFRGDVAEAVIRPLLRFLNATRSFYFVDAYPYFAWAANRDTISLDYALFQGA ASSHYVDPGTGLTYTNLLDQMLDAVVAAMGKLGYGNVKLAVSETGWPSAGDAGESGANVRNAATYNRNLAARMSKNPGTPARPGAKMPVFLFSLYNEDQK PGPGTERHWGLYYPNQTRVYEVD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 491 Download |
| MAAATVAPSA SSSHRAVAVL LLAAALACHL NAVAAADPEC HCPGGRCRGL GVNYGTVADD 60 LPSAARSVQL LRAAGAGAVK IYDANPDILR ALAGTGLPVA VMVPNEAIPS LASSRAAAEG 120 WVAANLAPHV PAARVMYLLV GNEVLSNRAA AGSTWRAIVP AMANLHRALR AHGIRKVKLG 180 TTLAMDALSA SYPPSAGAFR GDVAEAVIRP LLRFLNATRS FYFVDAYPYF AWAANRDTIS 240 LDYALFQGAA SSHYVDPGTG LTYTNLLDQM LDAVVAAMGK LGYGNVKLAV SETGWPSAGD 300 AGESGANVRN AATYNRNLAA RMSKNPGTPA RPGAKMPVFL FSLYNEDQKP GPGTERHWGL 360 YYPNQTRVYE VDLTGQRPSR SYPPLPPAGD TDSSPAWCVL ASGEGKAANE TAVQAALEYA 420 CQQGSGTCAA IQPGGACHEP DTLDAHASYA FNSYWQQFRN AGGTCFFNGL AEATTKDPSH 480 GSCKFQSSLD * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 4.0e-6 | 224 | 364 | 146 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 5.0e-16 | 397 | 471 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-35 | 397 | 485 | 89 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-107 | 50 | 372 | 324 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN29077.1 | 0 | 102 | 490 | 1 | 384 | unknown [Zea mays] |
| DDBJ | BAF24208.2 | 0 | 40 | 479 | 22 | 467 | Os08g0525800 [Oryza sativa Japonica Group] |
| GenBank | EAZ07710.1 | 0 | 40 | 479 | 22 | 467 | hypothetical protein OsI_29967 [Oryza sativa Indica Group] |
| RefSeq | NP_001062294.1 | 0 | 40 | 480 | 22 | 468 | Os08g0525800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002444717.1 | 0 | 6 | 490 | 1 | 484 | hypothetical protein SORBIDRAFT_07g026540 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 50 | 373 | 1 | 306 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1aq0_B | 0 | 50 | 373 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 50 | 373 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1ghs_B | 0 | 50 | 373 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 50 | 373 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
