Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si024796m |
Family | CBM43 |
Protein Properties | Length: 492 Molecular Weight: 53520.4 Isoelectric Point: 8.1006 |
Chromosome | Chromosome/Scaffold: 3 Start: 12195343 End: 12198202 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 377 | 458 | 3.1e-23 |
WCVFNKDAKDKYKDLPASVNYACSNADCTPLGYGSSCNGLSHDENISYAFNIYFQTMDQDVRACSFGGLAKITTTNASQGGC | |||
GH17 | 35 | 354 | 0 |
VGVNWGTMMSHPIHPSAVVGMLRANGVDRVKLFDADPWTVAALAGSGVQAMLAAPNDQLESLARDPRRARDWVRHNVTANLNAGVDVRYVAVGNEPFLKS YNGSFINITFPALKNMQRALDEAGFGQRIKVVVPLNADIYSSPENKPVPSAGSFRKDINALMVDIVNFLHVNDAPFVVNIYPFLSLYQNPNFPLNFSFFD GATKPVYDQGMVYTNVFDANFDTLVWSLRKAGVPDMRIIVGEVGWPTDGDKNANVKYAQRFYSGFLKNMAKNVGTPLRPGHMDVYLFALIDENQKSVLPG RFERHWGLFTYDGKPKFSMD |
Full Sequence |
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Protein Sequence Length: 492 Download |
MVPAARPAAT AAFAVGAVAL LLLVIPPPAA AAAAVGVNWG TMMSHPIHPS AVVGMLRANG 60 VDRVKLFDAD PWTVAALAGS GVQAMLAAPN DQLESLARDP RRARDWVRHN VTANLNAGVD 120 VRYVAVGNEP FLKSYNGSFI NITFPALKNM QRALDEAGFG QRIKVVVPLN ADIYSSPENK 180 PVPSAGSFRK DINALMVDIV NFLHVNDAPF VVNIYPFLSL YQNPNFPLNF SFFDGATKPV 240 YDQGMVYTNV FDANFDTLVW SLRKAGVPDM RIIVGEVGWP TDGDKNANVK YAQRFYSGFL 300 KNMAKNVGTP LRPGHMDVYL FALIDENQKS VLPGRFERHW GLFTYDGKPK FSMDLSGNGK 360 DNYLAEVKGV QYLPSQWCVF NKDAKDKYKD LPASVNYACS NADCTPLGYG SSCNGLSHDE 420 NISYAFNIYF QTMDQDVRAC SFGGLAKITT TNASQGGCMF PVQILSVSGR VAPLIFLPIS 480 LVLLVSVFTL L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.004 | 272 | 346 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-15 | 376 | 446 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-29 | 376 | 460 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-72 | 36 | 354 | 323 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAG88662.1 | 0 | 85 | 491 | 1 | 405 | unnamed protein product [Oryza sativa Japonica Group] |
GenBank | EEE64491.1 | 0 | 33 | 491 | 31 | 487 | hypothetical protein OsJ_19341 [Oryza sativa Japonica Group] |
RefSeq | NP_001056153.1 | 0 | 33 | 491 | 31 | 487 | Os05g0535100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001152213.1 | 0 | 38 | 466 | 33 | 460 | glucan endo-1,3-beta-glucosidase 5 [Zea mays] |
RefSeq | XP_002440138.1 | 0 | 38 | 468 | 34 | 463 | hypothetical protein SORBIDRAFT_09g026690 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 35 | 358 | 3 | 317 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 3ur8_A | 0 | 35 | 358 | 3 | 317 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 3ur7_B | 0 | 35 | 358 | 3 | 317 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 35 | 358 | 3 | 317 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 2cyg_A | 1.4013e-45 | 35 | 355 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |