Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si026278m |
Family | CBM43 |
Protein Properties | Length: 491 Molecular Weight: 51852.3 Isoelectric Point: 8.3555 |
Chromosome | Chromosome/Scaffold: 8 Start: 30246646 End: 30248118 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 372 | 457 | 1.2e-25 |
WCVLNPDAAAGGDDRLAGNVGYACGRADCTPLGYGCSCGGGALDARGNASYAFNAYYQSQGQAESACDFQGLAVVVDKDPSLGACK | |||
GH17 | 25 | 349 | 0 |
LGVNWGTMSTRRLPPKVMARLLADNGFRKVKIFDADERTMEGLAGTGIETMVAVPNDLLAAVADYARAREWVKENVTRYAFDGGVNIRFVAVGNEPFLRA YNGSFDRVTVPALRNIQRALDEAGHGGAVKATVPVNADVYDSPPGNPVPSAGRFRADVAGVMTEMVRLLNRSGAPLTVNIYPFLSLYGNDDFPLDYAFFD DAGAGKAKPVVDGRVNYTNVFDANFDTLVSALKRVGFGRLPVMIGEVGWPTDGDKHATAALAERFYKGLLRRLAARKGTPLRPNARIEVYLFGLMDEDAK SVAPGNFERHWGLFTSDGRPKFPLD |
Full Sequence |
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Protein Sequence Length: 491 Download |
MPALRCVLAS VLVVVVAAAA AADALGVNWG TMSTRRLPPK VMARLLADNG FRKVKIFDAD 60 ERTMEGLAGT GIETMVAVPN DLLAAVADYA RAREWVKENV TRYAFDGGVN IRFVAVGNEP 120 FLRAYNGSFD RVTVPALRNI QRALDEAGHG GAVKATVPVN ADVYDSPPGN PVPSAGRFRA 180 DVAGVMTEMV RLLNRSGAPL TVNIYPFLSL YGNDDFPLDY AFFDDAGAGK AKPVVDGRVN 240 YTNVFDANFD TLVSALKRVG FGRLPVMIGE VGWPTDGDKH ATAALAERFY KGLLRRLAAR 300 KGTPLRPNAR IEVYLFGLMD EDAKSVAPGN FERHWGLFTS DGRPKFPLDL RGGGRPAMPV 360 PARGVEYLPR RWCVLNPDAA AGGDDRLAGN VGYACGRADC TPLGYGCSCG GGALDARGNA 420 SYAFNAYYQS QGQAESACDF QGLAVVVDKD PSLGACKFSV GFVGSGAAAA AAVVMARTAA 480 VAAALLLVLL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-6 | 262 | 341 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-18 | 371 | 445 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-28 | 372 | 458 | 89 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-67 | 49 | 349 | 303 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG41694.1 | 0 | 23 | 466 | 26 | 463 | glucan endo-1,3-beta-glucosidase 5 precursor [Zea mays] |
GenBank | ACN32122.1 | 0 | 25 | 466 | 27 | 503 | unknown [Zea mays] |
GenBank | EAY81406.1 | 0 | 28 | 459 | 32 | 461 | hypothetical protein OsI_36575 [Oryza sativa Indica Group] |
RefSeq | NP_001140660.1 | 0 | 25 | 466 | 27 | 462 | hypothetical protein LOC100272735 [Zea mays] |
RefSeq | XP_002449743.1 | 0 | 28 | 470 | 29 | 477 | hypothetical protein SORBIDRAFT_05g022490 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 25 | 350 | 2 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3f55_C | 0 | 25 | 350 | 2 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3f55_B | 0 | 25 | 350 | 2 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3f55_A | 0 | 25 | 350 | 2 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3em5_D | 0 | 25 | 350 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |