Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si029650m |
Family | CBM43 |
Protein Properties | Length: 488 Molecular Weight: 52136.4 Isoelectric Point: 5.9766 |
Chromosome | Chromosome/Scaffold: 2 Start: 3634703 End: 3638531 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 370 | 451 | 8.9e-27 |
WCALNPNAKDLSKLGANIDYACTFADCTPLGYGSTCNGMDTAGNASYAFNAYYQVQNQKDDACDFQGLALPTETDPSTAACN | |||
GH17 | 26 | 347 | 0 |
LGMNWGTQASHPLPPKAVVQVLRDNGIKKVKLFDTDFAAMSALSGTGIEVMAAIPNNMLADLADDAGKAKDWVKRNVKRYDFDGGVTIKYVAVGNEPFLQ SYNGTFINITFPALQNIQNALNDAGVGDRIKATVPLNADVYNSPDSHPVPSAGRFRPDISGLMTDIVKFLAKNNAPFTVNIYPFLSLYLSDNFPLDYAFF DGGATPVNDNGVLYTNVFDANFDTLVAALRAVGHGDMPVVVGEVGWPTDGDKHAKVSYAQRFYAGLLRRLAANAGTPARPNQYIEVYLFGLVDEDLKSVA PGNFERHWGILRYDGQPKYPMD |
Full Sequence |
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Protein Sequence Length: 488 Download |
MARLAAALLL LVAVACWAVA PGAEALGMNW GTQASHPLPP KAVVQVLRDN GIKKVKLFDT 60 DFAAMSALSG TGIEVMAAIP NNMLADLADD AGKAKDWVKR NVKRYDFDGG VTIKYVAVGN 120 EPFLQSYNGT FINITFPALQ NIQNALNDAG VGDRIKATVP LNADVYNSPD SHPVPSAGRF 180 RPDISGLMTD IVKFLAKNNA PFTVNIYPFL SLYLSDNFPL DYAFFDGGAT PVNDNGVLYT 240 NVFDANFDTL VAALRAVGHG DMPVVVGEVG WPTDGDKHAK VSYAQRFYAG LLRRLAANAG 300 TPARPNQYIE VYLFGLVDED LKSVAPGNFE RHWGILRYDG QPKYPMDLAG QGRNTMLVPA 360 KGIKYLPKTW CALNPNAKDL SKLGANIDYA CTFADCTPLG YGSTCNGMDT AGNASYAFNA 420 YYQVQNQKDD ACDFQGLALP TETDPSTAAC NFTIQIAGAA AVHGRRSAGA AAAGVVLLAL 480 LQLLALW* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0003 | 254 | 339 | 86 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 5.0e-20 | 369 | 438 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-34 | 369 | 452 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 6.0e-68 | 26 | 347 | 323 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG29689.1 | 0 | 23 | 487 | 18 | 485 | glucan endo-1,3-beta-glucosidase 5 precursor [Zea mays] |
DDBJ | BAF20898.2 | 0 | 29 | 456 | 107 | 530 | Os07g0168600 [Oryza sativa Japonica Group] |
RefSeq | NP_001058984.1 | 0 | 29 | 456 | 28 | 451 | Os07g0168600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130924.1 | 0 | 23 | 462 | 19 | 460 | hypothetical protein LOC100192029 [Zea mays] |
RefSeq | XP_002459388.1 | 0 | 16 | 467 | 20 | 473 | hypothetical protein SORBIDRAFT_02g003910 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 348 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 24 | 348 | 1 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 24 | 348 | 1 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 24 | 348 | 1 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 24 | 348 | 1 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |