Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si035326m |
Family | CBM43 |
Protein Properties | Length: 500 Molecular Weight: 53634 Isoelectric Point: 7.384 |
Chromosome | Chromosome/Scaffold: 9 Start: 43411402 End: 43413171 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 375 | 456 | 2.3e-23 |
WCVLRPDASPTDPSIAGAVQYACQYSDCTSLGGGSSCGNLDARANVSYAFNQFFQAANQQKAACNFNNLSTIVTTDPSQGTC | |||
GH17 | 33 | 355 | 0 |
AANWGTRALHPLPGDITVRLLRDNGFDKVKLFEADQPALRALGHSGIQVMLGLPNDLLAGVAASVNAAEQWVLQNVSAYVSRYGVDIRYIAVGNEPFLKS YKGKFEAATLPAVQNVQAALVKAGLARQVRVTVPLNADVYESLDGRPSSGDFRPDISGLMVSLVRFLLDNGGILAINIYPFLSMDADPNFPVDYAFFPSP GAPPSQASVQDGNVLYTNVFDANYDTLIAALEKHGLGSIPVVVGEIGWPTDGDKNANVAAAQRFNQGLFDRIIAGKGTPRRPQMPDVYVFALLDEDNKSV DPGNFERHWGVFNYDGTPKYRLN |
Full Sequence |
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Protein Sequence Length: 500 Download |
MGSCAALRAL AVVLWVAAAY PVLFRARPVQ ALAANWGTRA LHPLPGDITV RLLRDNGFDK 60 VKLFEADQPA LRALGHSGIQ VMLGLPNDLL AGVAASVNAA EQWVLQNVSA YVSRYGVDIR 120 YIAVGNEPFL KSYKGKFEAA TLPAVQNVQA ALVKAGLARQ VRVTVPLNAD VYESLDGRPS 180 SGDFRPDISG LMVSLVRFLL DNGGILAINI YPFLSMDADP NFPVDYAFFP SPGAPPSQAS 240 VQDGNVLYTN VFDANYDTLI AALEKHGLGS IPVVVGEIGW PTDGDKNANV AAAQRFNQGL 300 FDRIIAGKGT PRRPQMPDVY VFALLDEDNK SVDPGNFERH WGVFNYDGTP KYRLNLAGGR 360 PLVPAKGVRY LSKQWCVLRP DASPTDPSIA GAVQYACQYS DCTSLGGGSS CGNLDARANV 420 SYAFNQFFQA ANQQKAACNF NNLSTIVTTD PSQGTCRFEI MIDTGRHELT GKSAAGRVGS 480 SWWSAVPLVL GFVSLVVAW* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 0.0006 | 374 | 422 | 56 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
COG5309 | COG5309 | 4.0e-6 | 269 | 347 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
smart00768 | X8 | 2.0e-15 | 374 | 458 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-73 | 50 | 355 | 308 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP12947.1 | 0 | 25 | 469 | 22 | 466 | putative 1,3-beta-glucanase [Oryza sativa Japonica Group] |
GenBank | EAY90344.1 | 0 | 25 | 469 | 22 | 466 | hypothetical protein OsI_11921 [Oryza sativa Indica Group] |
RefSeq | NP_001147933.1 | 0 | 25 | 481 | 23 | 481 | glucan endo-1,3-beta-glucosidase 5 [Zea mays] |
RefSeq | XP_002467735.1 | 0 | 25 | 497 | 23 | 498 | hypothetical protein SORBIDRAFT_01g033200 [Sorghum bicolor] |
RefSeq | XP_002516181.1 | 0 | 27 | 496 | 37 | 498 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 50 | 356 | 19 | 306 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1aq0_B | 0 | 50 | 356 | 19 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 50 | 356 | 19 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 1.96182e-44 | 43 | 356 | 13 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 3.9937e-43 | 50 | 356 | 19 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |