Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si035350m |
Family | CBM43 |
Protein Properties | Length: 496 Molecular Weight: 52125.9 Isoelectric Point: 4.5249 |
Chromosome | Chromosome/Scaffold: 9 Start: 9794080 End: 9797290 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 378 | 459 | 1.7e-25 |
WCVANPNAPDTSRISDGVAYACSLSDCTALGYGSSCNGLDAAGNASYAFNMYFQVQNQAEGSCDFQGLAVTTAQNPSTDACN | |||
GH17 | 29 | 351 | 0 |
LGVNWGTMATHRLPSGTVVRMLQDNGIRKVKLFDADPGPMDALAGSGIEVMVGIPNNMLDMMTDYGTARDWVHENVSRYNFDGGVTIKYVAVGNEPFLSA FNGTFLNVTLPALQNIQRALDDAGLGESIKATVPLNADVYNSPVSNPVPSAGRFRSDIADLMTEIVQFLNQSGAPFTVNIYPFLSLYGSDGFPLDYAFFD GTSSPVVDAGSGITYTNVFDANFDTLVSALAAAGAGGLPVVVGEVGWPTDGDTHATAAYAQKFYAGLLRKLAANAGTPLRPSQYIEVYLFSLIDEDAKSV APGNFERHWGIVRYDGQPKYPMD |
Full Sequence |
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Protein Sequence Length: 496 Download |
MAAASYHWLA VMAALVVALV AGLPAAGALG VNWGTMATHR LPSGTVVRML QDNGIRKVKL 60 FDADPGPMDA LAGSGIEVMV GIPNNMLDMM TDYGTARDWV HENVSRYNFD GGVTIKYVAV 120 GNEPFLSAFN GTFLNVTLPA LQNIQRALDD AGLGESIKAT VPLNADVYNS PVSNPVPSAG 180 RFRSDIADLM TEIVQFLNQS GAPFTVNIYP FLSLYGSDGF PLDYAFFDGT SSPVVDAGSG 240 ITYTNVFDAN FDTLVSALAA AGAGGLPVVV GEVGWPTDGD THATAAYAQK FYAGLLRKLA 300 ANAGTPLRPS QYIEVYLFSL IDEDAKSVAP GNFERHWGIV RYDGQPKYPM DLSGGQGGNA 360 APAALVAARG VQYLPRQWCV ANPNAPDTSR ISDGVAYACS LSDCTALGYG SSCNGLDAAG 420 NASYAFNMYF QVQNQAEGSC DFQGLAVTTA QNPSTDACNF TIQIEPSAAG RRRRAPVAAA 480 LPLLLVLRAV LQVVL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 5.0e-17 | 377 | 447 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-31 | 377 | 460 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-59 | 32 | 351 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAT42176.1 | 0 | 32 | 473 | 37 | 472 | putative 3-glucanase [Zea mays] |
RefSeq | NP_001050810.1 | 0 | 25 | 473 | 23 | 468 | Os03g0656800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001051526.1 | 0 | 24 | 473 | 29 | 472 | Os03g0792800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147672.1 | 0 | 32 | 467 | 37 | 466 | glucan endo-1,3-beta-glucosidase 5 [Zea mays] |
RefSeq | XP_002466725.1 | 0 | 34 | 470 | 36 | 469 | hypothetical protein SORBIDRAFT_01g012900 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 29 | 353 | 2 | 316 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3f55_C | 0 | 29 | 353 | 2 | 316 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3f55_B | 0 | 29 | 353 | 2 | 316 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3f55_A | 0 | 29 | 353 | 2 | 316 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3em5_D | 0 | 29 | 353 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |