CAZyme Information

Basic Information
SpeciesSetaria italica
Cazyme IDSi036765m
FamilyGH18
Protein PropertiesLength: 308 Molecular Weight: 33648.8 Isoelectric Point: 5.6125
ChromosomeChromosome/Scaffold: 9 Start: 21752566 End: 21753670
Description
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH18672231.7e-22
  TTATEPPTPTNGQFNIFWQNTVLTASDVASIKQSNPNVRVAVSLGGATVNNRPVFFNITSVDSWVKNAVSSLTKIVQEYNLDGIDIDYEQFQVDPATFAE
  CVGRLVTTLKSNGVIKMASIAPFDNADVQRHYQALWNSYGSVIDYINFQFYAYSAST
Full Sequence
Protein Sequence     Length: 308     Download
MASSKLLAVV FLSSLLALHA PMTTTAANSN LFRDYIGAIF NGVKFTDVPI NPKVRFDFIL    60
AFVIDYTTAT EPPTPTNGQF NIFWQNTVLT ASDVASIKQS NPNVRVAVSL GGATVNNRPV    120
FFNITSVDSW VKNAVSSLTK IVQEYNLDGI DIDYEQFQVD PATFAECVGR LVTTLKSNGV    180
IKMASIAPFD NADVQRHYQA LWNSYGSVID YINFQFYAYS ASTTEAQYVS HFDNQIANYP    240
GGNILASFTT APTTTSVPIN TSLNACQTLQ SQGKLYGIFI WAADHSRSQG FRYDTQAQAL    300
LANAPSY* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd02871GH18_chitinase_D-like6.0e-7105217130+
cd06548GH18_chitinase2.0e-79715559+
pfam00704Glyco_hydro_181.0e-1198219132+
cd00598GH18_chitinase-like6.0e-1258217169+
cd06544GH18_narbonin9.0e-12231286257+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAO15366.10283042278AF330230_1 chitinase [Oryza sativa Japonica Group]
GenBankACF88258.102130623307unknown [Zea mays]
RefSeqNP_001064605.102830427303Os10g0416100 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001152001.102130623307chitinase 2 [Zea mays]
RefSeqXP_002467243.1013061308hypothetical protein SORBIDRAFT_01g021920 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3sim_B0313012273A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB3sim_A0313012273A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB1nar_A2e-28312864266A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
PDB4ac1_X0.0000087528156255X Chain X, The Structure Of A Fungal Endo-Beta-N-Acetylglucosaminidase From Glycosyl Hydrolase Family 18, At 1.3a Resolution
PDB3qok_A0.000039422398231A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae
Metabolic Pathways
Pathway NameReactionECProtein Name
chitin degradation II3.2.1.14-RXNEC-3.2.1.14chitinase
chitin degradation IIRXN-12623EC-3.2.1.14chitinase
chitin degradation IIRXN-12624EC-3.2.1.14chitinase
chitin degradation III (carnivorous plants)3.2.1.14-RXNEC-3.2.1.14chitinase
Signal Peptide
Cleavage Site
26
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO304470224853080
CT853760286213060
EE176053256212760
EE032877254212740
EE176407253212730
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_046_00008.1Aquca_014_00353.1Aquca_010_00636.1Aquca_027_00184.1
Brachypodium distachyonBradi3g26850.1Bradi3g26810.1Bradi3g26840.1
Carica papayaevm.model.supercontig_139.6
Citrus clementinaCiclev10028881mCiclev10003729m
Citrus sinensisorange1.1g021511morange1.1g046094m
Eucalyptus grandisEucgr.B02439.1Eucgr.J02106.1
Fragaria vescamrna14033.1-v1.0-hybrid.59.211mrna14019.1-v1.0-hybridmrna15882.1-v1.0-hybridmrna14034.1-v1.0-hybridmrna17899.1-v1.0-hybrid
mrna22564.1-v1.0-hybrid
Glycine maxGlyma11g15512.1Glyma09g21615.1Glyma13g40590.1
Gossypium raimondiiGorai.003G135700.1Gorai.003G135800.1Gorai.003G134100.1Gorai.003G129600.1Gorai.011G120000.1
Gorai.003G138400.1
Linum usitatissimumLus10005172
Malus domesticaMDP0000904158MDP0000885802MDP0000644797MDP0000312089
Manihot esculentacassava4.1_024209mcassava4.1_027074m
Medicago truncatulaMedtr6g079630.1Medtr2g096030.1
Mimulus guttatusmgv1a019267mmgv1a024804m
Oryza sativaLOC_Os10g28050.1LOC_Os10g28080.1
Panicum virgatumPavirv00061810mPavirv00014582mPavirv00031712m
Phaseolus vulgarisPhvul.011G069900.1
Picea abiesMA_38396g0010MA_10427109g0010
Populus trichocarpaPotri.012G102400.1Potri.015G100500.1Potri.015G100600.1Potri.001G341700.1
Prunus persicappa023801mppa009038mppa009096m
Ricinus communis30039.m00023530039.m000234
Setaria italicaSi022612mSi026720mSi028172mSi036774m
Selaginella moellendorffii41118115493
Sorghum bicolorSb01g021920.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny