| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si040250m |
| Family | CBM43 |
| Protein Properties | Length: 487 Molecular Weight: 52160.6 Isoelectric Point: 7.7901 |
| Chromosome | Chromosome/Scaffold: 9 Start: 49029558 End: 49031916 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 373 | 452 | 1.5e-24 |
| WCVLDNNKDLSNISSSFSAACSNGDCTALLPGGSCSGLGWPGNVSYAFNNYYQQHDQSEDSCNFNGLGLITTVDPSVDNC | |||
| GH17 | 33 | 351 | 0 |
| VGVNWGFASSHPLPAARVVQGLLLPNSVPRVRLAAASSDALSALAGTGVAVTVGVPDALLRPLASSIKAAAAWVHDNITRYASSVRFEYISVGDEPFLMS HGQHFQPYVVPAAANIKKALTAAKVSSKIKVVVPCSVDTYQNASVLPSKASFRPDVNKTMAELLSFLTNNSSPFMVELNPFLSFQQHKNLSLDYYLFQLM SHPVKDGQNKYDNYFDASIDALVTALTEAGYGDMDIIVGRAGWPTDGAVNATPAIAQSFMTGLVNHLAKKSGTPLRPKVPPIETYLFSLLDEDQRNTASG GYERHHGIFTFDGQAKYYA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 487 Download |
| MPSNRRRPLP PFVPGLLLPL LLAVAPPPAA SAVGVNWGFA SSHPLPAARV VQGLLLPNSV 60 PRVRLAAASS DALSALAGTG VAVTVGVPDA LLRPLASSIK AAAAWVHDNI TRYASSVRFE 120 YISVGDEPFL MSHGQHFQPY VVPAAANIKK ALTAAKVSSK IKVVVPCSVD TYQNASVLPS 180 KASFRPDVNK TMAELLSFLT NNSSPFMVEL NPFLSFQQHK NLSLDYYLFQ LMSHPVKDGQ 240 NKYDNYFDAS IDALVTALTE AGYGDMDIIV GRAGWPTDGA VNATPAIAQS FMTGLVNHLA 300 KKSGTPLRPK VPPIETYLFS LLDEDQRNTA SGGYERHHGI FTFDGQAKYY ANIGQGPKPL 360 KNAPDVNYVP SKWCVLDNNK DLSNISSSFS AACSNGDCTA LLPGGSCSGL GWPGNVSYAF 420 NNYYQQHDQS EDSCNFNGLG LITTVDPSVD NCLFPLAIRT SAATSLHLTL ATFRLVVLWL 480 CILFIV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0005 | 264 | 344 | 85 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-10 | 372 | 440 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-24 | 372 | 454 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-42 | 88 | 349 | 263 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95444.1 | 0 | 33 | 481 | 35 | 483 | Glycosyl hydrolases family 17 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ACF78459.1 | 0 | 33 | 485 | 32 | 484 | unknown [Zea mays] |
| GenBank | EEC75046.1 | 0 | 33 | 481 | 35 | 483 | hypothetical protein OsI_11151 [Oryza sativa Indica Group] |
| RefSeq | NP_001130286.1 | 0 | 33 | 485 | 32 | 484 | hypothetical protein LOC100191380 [Zea mays] |
| RefSeq | XP_002468022.1 | 0 | 33 | 467 | 32 | 466 | hypothetical protein SORBIDRAFT_01g038220 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 33 | 353 | 2 | 315 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 3f55_C | 0 | 33 | 353 | 2 | 315 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 3f55_B | 0 | 33 | 353 | 2 | 315 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 3f55_A | 0 | 33 | 353 | 2 | 315 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 3em5_D | 0 | 33 | 353 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
