| Basic Information | |
|---|---|
| Species | Mimulus guttatus |
| Cazyme ID | mgv1a006794m |
| Family | CE8 |
| Protein Properties | Length: 432 Molecular Weight: 46535.3 Isoelectric Point: 4.8145 |
| Chromosome | Chromosome/Scaffold: 124 Start: 98088 End: 100376 |
| Description | pectin methylesterase PCR fragment F |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 134 | 413 | 0 |
| ISVSKNGKSDYRTISEAVDASPSHSPFRICILIAAGEYDEKVVVGRFKSNLTLIGEGSQKTTITSNSTLPLKVIGVTATLSISGTAFMARDLTVLNSAQH GVAVESWSDYSVFFRVILKGVNTTLIAGGGNQFYRSCLFYGKSYLVVGNADSFFQKCDFYSEISHSDETAVFLGQSRNSLNFQTGFLIHQCGFYAPGVPT DHSKVFLGSALGDYALIVVMQSYLDAPVARYFENTPPLIDSSFVTFGNSGRGSTIERESSVVHPLGLEAAEARYSLRTFI | |||
| Full Sequence |
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| Protein Sequence Length: 432 Download |
| MDDSAFHVSP SSSSPAADPS DVEYLDIQAA SESSGNNSGS QGSVDSLEVG MGSPMSVGSI 60 PSYHGTPDHI HDGPNFPPAN PVEADGFNWT RFLKLIGAIV VVCAFVLLIA LIFTKTRKKE 120 DLMPRTDEDC MIRISVSKNG KSDYRTISEA VDASPSHSPF RICILIAAGE YDEKVVVGRF 180 KSNLTLIGEG SQKTTITSNS TLPLKVIGVT ATLSISGTAF MARDLTVLNS AQHGVAVESW 240 SDYSVFFRVI LKGVNTTLIA GGGNQFYRSC LFYGKSYLVV GNADSFFQKC DFYSEISHSD 300 ETAVFLGQSR NSLNFQTGFL IHQCGFYAPG VPTDHSKVFL GSALGDYALI VVMQSYLDAP 360 VARYFENTPP LIDSSFVTFG NSGRGSTIER ESSVVHPLGL EAAEARYSLR TFIGGIDWIP 420 DDVDHDMDLA R* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02484 | PLN02484 | 6.0e-34 | 134 | 420 | 302 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 5.0e-34 | 134 | 421 | 304 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02506 | PLN02506 | 4.0e-34 | 101 | 361 | 283 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 3.0e-40 | 134 | 420 | 305 | + pectinesterase | ||
| pfam01095 | Pectinesterase | 1.0e-45 | 134 | 415 | 300 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001057041.1 | 1e-34 | 132 | 419 | 272 | 574 | Os06g0193200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002436630.1 | 1e-33 | 126 | 419 | 288 | 595 | hypothetical protein SORBIDRAFT_10g006230 [Sorghum bicolor] |
| RefSeq | XP_002453720.1 | 2e-33 | 134 | 420 | 244 | 550 | hypothetical protein SORBIDRAFT_04g011210 [Sorghum bicolor] |
| RefSeq | XP_002467727.1 | 9e-35 | 117 | 421 | 266 | 582 | hypothetical protein SORBIDRAFT_01g033140 [Sorghum bicolor] |
| RefSeq | XP_002532945.1 | 1e-38 | 134 | 420 | 282 | 579 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 1e-25 | 134 | 355 | 9 | 238 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 2e-24 | 136 | 357 | 7 | 236 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2nt9_B | 0.0000007 | 137 | 321 | 12 | 222 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2nt9_A | 0.0000007 | 137 | 321 | 12 | 222 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2nt6_B | 0.0000007 | 137 | 321 | 12 | 222 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Transmembrane Domains | |||||
|---|---|---|---|---|---|
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| Start | End | ||||
| 92 | 114 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CV521163 | 147 | 286 | 432 | 0 |
| CV521163 | 61 | 226 | 286 | 0 |
| GT738552 | 243 | 125 | 358 | 7e-32 |
| HO852920 | 299 | 134 | 419 | 9e-32 |
| DR047978 | 238 | 129 | 358 | 2e-31 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Mimulus guttatus | mgv1a024923m | mgv1a022808m | mgv1a021640m | mgv1a020206m | mgv1a021467m |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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