Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna05145.1-v1.0-hybrid |
Family | GH17 |
Protein Properties | Length: 391 Molecular Weight: 42512.3 Isoelectric Point: 6.251 |
Chromosome | Chromosome/Scaffold: 4 Start: 22570400 End: 22573229 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 53 | 364 | 0 |
VGVCYGMMGNNLPSHSEVISLLKSNNIDRTRLYEPNHGALEALRGSNIELILGVPNSLLQDFAANPSNAQNWVQTNVLNFYPSVRIKYIAVGNEVSPVNG DTSLAQFLLPAMQHVYQAVRAANLHDLIKVSTAIDTTLIGVSYPPSQGAFRGDVRGYLDPIIGYLVYAQAPLLANIYTYFSYAGNPRDISLPYALFTSPS VVAWDGDKGYQNLFDAMLDGLYSALEGAWGGSLEVVVSESGWPSAGGFGTSPENAQTYYSKLIQHVKGGTPKRPNKAIETYLFALFDENQKSPELEKHFG VFYPNKQPKYQL |
Full Sequence |
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Protein Sequence Length: 391 Download |
MIEALPGLTR VRRAWLFFSM AMATISLPFT TSIMFLLGLL VGILYIPGAQ SSVGVCYGMM 60 GNNLPSHSEV ISLLKSNNID RTRLYEPNHG ALEALRGSNI ELILGVPNSL LQDFAANPSN 120 AQNWVQTNVL NFYPSVRIKY IAVGNEVSPV NGDTSLAQFL LPAMQHVYQA VRAANLHDLI 180 KVSTAIDTTL IGVSYPPSQG AFRGDVRGYL DPIIGYLVYA QAPLLANIYT YFSYAGNPRD 240 ISLPYALFTS PSVVAWDGDK GYQNLFDAML DGLYSALEGA WGGSLEVVVS ESGWPSAGGF 300 GTSPENAQTY YSKLIQHVKG GTPKRPNKAI ETYLFALFDE NQKSPELEKH FGVFYPNKQP 360 KYQLGGFGGG RLETSNSAEY NVTTSLKSDT * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-6 | 277 | 358 | 89 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-161 | 53 | 364 | 313 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 53 | 364 | 2 | 313 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 3f55_C | 0 | 53 | 364 | 2 | 313 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 3f55_B | 0 | 53 | 364 | 2 | 313 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 3f55_A | 0 | 53 | 364 | 2 | 313 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 3em5_D | 0 | 53 | 364 | 2 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |