Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna05266.1-v1.0-hybrid |
Family | GT14 |
Protein Properties | Length: 465 Molecular Weight: 52167.9 Isoelectric Point: 5.0564 |
Chromosome | Chromosome/Scaffold: 6 Start: 28669950 End: 28673383 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT14 | 101 | 348 | 0 |
IAYWISSTNGEKCEKMLRLLKAIYHPRNQYLLQLDADSSGYEREQLALYVQSQGVFRTFDNVNVVGQSYGINHMGSSSLAATLHAAALLLKLSADWDWFI ALSSSDYPLMPQDDLLHALTSLPRNLNFVHFTDKTGWKEQKRVEKIVLDPTIHLQNSTPLSTLNYSSNITREIPDSFKVFGGSPWGILSRDFMEYCVQGW DNLPRELLMYLSNVVYPLDYYFHTIICNSPEFQNSLVDNDLSFTVWNL |
Full Sequence |
---|
Protein Sequence Length: 465 Download |
MEPTQKDWRE DSRRSVSKEE CAALKTSGEQ MKVPGIYSSS TVSADEIQEE GFPLWVMVLV 60 VTSVLLGTLS LTSQSVFCRV GNKYQISARF PLKGNGNPPV IAYWISSTNG EKCEKMLRLL 120 KAIYHPRNQY LLQLDADSSG YEREQLALYV QSQGVFRTFD NVNVVGQSYG INHMGSSSLA 180 ATLHAAALLL KLSADWDWFI ALSSSDYPLM PQDDLLHALT SLPRNLNFVH FTDKTGWKEQ 240 KRVEKIVLDP TIHLQNSTPL STLNYSSNIT REIPDSFKVF GGSPWGILSR DFMEYCVQGW 300 DNLPRELLMY LSNVVYPLDY YFHTIICNSP EFQNSLVDND LSFTVWNLTA FGETQVLNMS 360 HYEQMLASEA AFARPFHTGD QVLNKIDESV LNRSSKGLVP GEWCLGEGRS MGLENSADDH 420 EELCSTWVNI NSVNPGSRGI SLAALLTNLI VEGRFTTSHC QEHW* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-44 | 101 | 347 | 247 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 3.0e-93 | 99 | 461 | 363 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.000000003 | 112 | 336 | 95 | 299 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.000000003 | 112 | 336 | 95 | 299 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.000000003 | 112 | 336 | 95 | 299 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.000000003 | 112 | 336 | 95 | 299 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000000008 | 101 | 336 | 86 | 299 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
Sequence Alignments (This image is cropped. Click for full image.) |
---|