Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna07685.1-v1.0-hybrid |
Family | GT47 |
Protein Properties | Length: 581 Molecular Weight: 67068.5 Isoelectric Point: 10.2768 |
Chromosome | Chromosome/Scaffold: Start: 8773111 End: 8779967 |
Description | Exostosin family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 216 | 351 | 4.3e-30 |
KRSFKIYVYPHRKDDPFANALLPVDFEPAGNYASESYFKKVLMESHFITNDPTQAQLFFLPFSIARLRHDPRVGVGGIQDFIRDYMFNISHKYEYWNRTG GADHFYVACHSIGRSAMEKATQVKFNAIQLVCSSSY | |||
GT47 | 357 | 466 | 3.6e-34 |
KLAFFAGGINSPVRERLLQVWRNDSEIFVNFGRLKTSYADALLGSMFCLHVKGFEVNTARIADSLYYGCVPVIIANYYDLPFADILNWKSFSVVVATLDI PLLKNILKGI |
Full Sequence |
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Protein Sequence Length: 581 Download |
MEATEMEQWT PSATLPSSRA RRSDHQPLRK RSFGGFGILN NTSRAPSLAY WLAVRRFTRY 60 QPEFKQLAKT VIIRESAAMP KIPESLKVRA KNIFLVPLFS FSLAFAFLCL FLRDPSMASL 120 VLLYLSQWRL PRSFFFIPTT LALATSLLIL FYISTTSNLF PHHPPLPNLS SFAPHLYPFQ 180 SQRSLPPNSA PNGNYDNNNE VFHDTHIFVQ DYKEMKRSFK IYVYPHRKDD PFANALLPVD 240 FEPAGNYASE SYFKKVLMES HFITNDPTQA QLFFLPFSIA RLRHDPRVGV GGIQDFIRDY 300 MFNISHKYEY WNRTGGADHF YVACHSIGRS AMEKATQVKF NAIQLVCSSS YFLSGTKLAF 360 FAGGINSPVR ERLLQVWRND SEIFVNFGRL KTSYADALLG SMFCLHVKGF EVNTARIADS 420 LYYGCVPVII ANYYDLPFAD ILNWKSFSVV VATLDIPLLK NILKGIRSDE YMRLRNNVFK 480 VRNQFQWHLS PIDYDAFHME REKKAYKERM AELKGEIKRN KEEREKKKKE NMLRTGTKLQ 540 IISNPKTIQR IAKTKDRKNL KPVPEELLKR NNKKSGLLVT * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-59 | 215 | 466 | 296 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |