Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna09482.1-v1.0-hybrid |
Family | AA2 |
Protein Properties | Length: 340 Molecular Weight: 37368.9 Isoelectric Point: 7.3372 |
Chromosome | Chromosome/Scaffold: 5 Start: 10588879 End: 10589898 |
Description | Peroxidase superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 46 | 317 | 0 |
QKIVRETVTDKQSEKPVTAAGTLRLFFHDCMVTGCDASLLISSNHVNKAERDADPNLSLSGDAFDVVRKAKTTLELTCPGVVSCSDILAEATRDLVTMVG GPFYKVKLGRLDGRVSKAELADANLPRTNQTMDEMIKFFESKGFTVQEMVALSGAHTIGFSHCKEFTGRLFNYNKTTPTDPDMHPKLAEGLKRTCANFIQ DPSMSAFNDPITPGKFDNMYYQNLKRRLGLLTSDNALLKDPRTKPLVELYATNQQAFFDAFSKVMEKLSFYG |
Full Sequence |
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Protein Sequence Length: 340 Download |
MAATLPALLV LCIAFPLTLT SAAGPAQPPL PVLTEDYYAK TCPDFQKIVR ETVTDKQSEK 60 PVTAAGTLRL FFHDCMVTGC DASLLISSNH VNKAERDADP NLSLSGDAFD VVRKAKTTLE 120 LTCPGVVSCS DILAEATRDL VTMVGGPFYK VKLGRLDGRV SKAELADANL PRTNQTMDEM 180 IKFFESKGFT VQEMVALSGA HTIGFSHCKE FTGRLFNYNK TTPTDPDMHP KLAEGLKRTC 240 ANFIQDPSMS AFNDPITPGK FDNMYYQNLK RRLGLLTSDN ALLKDPRTKP LVELYATNQQ 300 AFFDAFSKVM EKLSFYGVKT GKDGEVRRRC DTFNDVITS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00141 | peroxidase | 5.0e-6 | 267 | 298 | 32 | + Peroxidase. | ||
cd00691 | ascorbate_peroxidase | 6.0e-27 | 141 | 319 | 192 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
pfam00141 | peroxidase | 2.0e-57 | 49 | 203 | 155 | + Peroxidase. | ||
PLN03030 | PLN03030 | 7.0e-69 | 37 | 334 | 306 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 5.0e-156 | 33 | 331 | 299 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3hdl_A | 0 | 37 | 334 | 6 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1bgp_A | 0 | 26 | 334 | 1 | 305 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
PDB | 1qo4_A | 0 | 33 | 334 | 3 | 304 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
PDB | 1pa2_A | 0 | 33 | 334 | 3 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1sch_B | 0 | 33 | 330 | 2 | 290 | A Chain A, Peanut Peroxidase |