Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna12197.1-v1.0-hybrid |
Family | GH27 |
Protein Properties | Length: 908 Molecular Weight: 101416 Isoelectric Point: 6.1831 |
Chromosome | Chromosome/Scaffold: 5 Start: 25257024 End: 25268237 |
Description | alpha-galactosidase 2 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 364 | 493 | 2.5e-30 |
GVEDPATWAASVGNSWRTTGDISDNWDSMTSRADQNDIWASYAGPGGWNDPDMLEVGNGGMTLEEYRAHFSIWALAKAPLLIGCDIRSMDDATLSLLSNK EVIAVNQDKLGAQGKQVTSGTDLQVWAGPL | |||
GH27 | 210 | 323 | 1.1e-33 |
SSTGQDHIRRNLLDNGLGLTPPMGWNSWNHFNCHIEEKLIKETADSMVSTGLAALGYEYINLDDCWAEQNRDSEGNLVAKSSAFPSGIKALADYVHSKGL KLGIYSDAGTLTCS |
Full Sequence |
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Protein Sequence Length: 908 Download |
MVTCQCPFGT LSAKSGSGFK SGSGQEMRCG FAGEAAPEKP PEALKQRDDE ERESGERFKG 60 QAFMEIQGRM IELTAKLKQV QNQMRNKEGE KKRAFLTLEE IRPLPEDANT YKSIVMASRF 120 VLEPKSVLVS EQEQKLQDSE SAIALLQTSK EYIEKQIGEV ETNLRELLNQ DPGLARQIMS 180 MTLRAGLVAI CISFVFNTNC AIAARQLMRS STGQDHIRRN LLDNGLGLTP PMGWNSWNHF 240 NCHIEEKLIK ETADSMVSTG LAALGYEYIN LDDCWAEQNR DSEGNLVAKS SAFPSGIKAL 300 ADYVHSKGLK LGIYSDAGTL TCSKEMPGSL GHEEQDAHTF ASWGIDYLKY DNCHSTGTSP 360 KERGVEDPAT WAASVGNSWR TTGDISDNWD SMTSRADQND IWASYAGPGG WNDPDMLEVG 420 NGGMTLEEYR AHFSIWALAK APLLIGCDIR SMDDATLSLL SNKEVIAVNQ DKLGAQGKQV 480 TSGTDLQVWA GPLSDNRVAL VLWNRSPSKA TVTAHWSDIG LKPATVVEAR DLWEHSTGPS 540 VSEKLSADLE SHACKMLRRG SQEIWSRHPF DRTSVSDHTT LQNSNMHGIW TKEVALRSVI 600 GGLRSGRSWN QYISPAAARN VESAEFQWRK MMSTGSASAE KEEKESEVKK VEDSTVVSNY 660 WGIMRPKITR EDGTEWPWNC FKPWDTYRAD TSIDLSKHHV PKNFQDRVAF RAVKFLRVLS 720 DLYFKERHGC HAMMLETVAG VPGMVGGMVL HLRSLRRFEH SGGWIKALLE EAENERMHLM 780 TVGELVKPVW HERLLVLAAQ GVFFNAFFVF YLLSPKIAHR FTGYLEEEAV ISYTDYLKAI 840 EDGKIENVPA PAIAIDYWRL PKDARLLDVI TVIRADEAHH RDVNHFASDI QFQGKELREA 900 PAPIGYH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01786 | AOX | 8.0e-100 | 685 | 889 | 214 | + Alternative oxidase. The alternative oxidase is used as a second terminal oxidase in the mitochondria, electrons are transfered directly from reduced ubiquinol to oxygen forming water. This is not coupled to ATP synthesis and is not inhibited by cyanide, this pathway is a single step process. In rice the transcript levels of the alternative oxidase are increased by low temperature. | ||
PLN02478 | PLN02478 | 9.0e-157 | 660 | 907 | 248 | + alternative oxidase | ||
PLN02229 | PLN02229 | 8.0e-165 | 222 | 556 | 361 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 0 | 207 | 556 | 372 | + alpha-galactosidase | ||
PLN02692 | PLN02692 | 0 | 215 | 556 | 365 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005740 | mitochondrial envelope |
GO:0005975 | carbohydrate metabolic process |
GO:0006457 | protein folding |
GO:0007585 | respiratory gaseous exchange |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 222 | 556 | 1 | 356 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 223 | 558 | 2 | 389 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 222 | 533 | 1 | 356 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 222 | 533 | 1 | 356 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3lxc_B | 0 | 222 | 505 | 1 | 325 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Sequence Alignments (This image is cropped. Click for full image.) |
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