| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna15254.1-v1.0-hybrid |
| Family | GH14 |
| Protein Properties | Length: 1121 Molecular Weight: 124315 Isoelectric Point: 8.2481 |
| Chromosome | Chromosome/Scaffold: 2 Start: 22792630 End: 22805760 |
| Description | beta-amylase 4 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH14 | 80 | 443 | 0 |
| YVMMPVDAFCIDGSGIPRIRRVKALTVSLKALKLAGVHGVAVEVWWGVVERFSPLAYDWSLYEQLFKLISESGLKVHVALSFHSNVNSSSSRYVGVSLPL WIMQIGASNKHIFYRDKNGFSSDDYLTLGVDHLPLFCGRTALQCYEDFMTSFVKKFESHIGSVIEEICVGLGPSGELRYPAHFGDGKWKFPGIGEFQCYD QYMLDNLKMAACEEGKPQWGERGPPNAGCYNSMPSGVPFFEEGEENFLSDYGCFFLEWYSGCLLGHADAILAKAAKILKKYQEDKQASILLVAKIGGIYW WYQTVAHPAELTAGYYNTALRDGYDPVASLLSRHGAALHVSCLEMMDSESPASYLCSPEGLRQQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1121 Download |
| MAMAENGGVV CKCSPRRSFR FRFRQPNLRN VSSIPLFKHA LFTRSPSLAG KASTILSMSA 60 QKKPRPSILS SSRHKRIPIY VMMPVDAFCI DGSGIPRIRR VKALTVSLKA LKLAGVHGVA 120 VEVWWGVVER FSPLAYDWSL YEQLFKLISE SGLKVHVALS FHSNVNSSSS RYVGVSLPLW 180 IMQIGASNKH IFYRDKNGFS SDDYLTLGVD HLPLFCGRTA LQCYEDFMTS FVKKFESHIG 240 SVIEEICVGL GPSGELRYPA HFGDGKWKFP GIGEFQCYDQ YMLDNLKMAA CEEGKPQWGE 300 RGPPNAGCYN SMPSGVPFFE EGEENFLSDY GCFFLEWYSG CLLGHADAIL AKAAKILKKY 360 QEDKQASILL VAKIGGIYWW YQTVAHPAEL TAGYYNTALR DGYDPVASLL SRHGAALHVS 420 CLEMMDSESP ASYLCSPEGL RQQSYAVLNL LNRKDQCHDY AGVVRFRPLA GVEVVIWSAS 480 KKRIIHLTGR NTNERCDKVS LWQIHANCYH SQAEAKDEHK LVRHLIKPDL TTKLGRTALS 540 IVTENSSRSR VLGNSVASTE QHMMDSEIQT ANTSPDDRAP CIFRKSIQPV TLKFEEVVYK 600 IKIKNVGMIG GMLWPKTEET EKVILKGVTG MAEPGEILAM LGPSGSGKTT LLTALGGRLS 660 GQLAGTITYN GKTISNAMKR NTGFVSQDDF LYPHLTVTET LVFTALLRLP NTLTKEEKAS 720 QAESVIAQLG LSQCRNSIIG HEFLRGVSGG ERRRVSIGQE LLVNPSLLLL DEPTSGLDST 780 TARMIVTLLL LSEGNALYFG KVSAVMDYFS DIGFSPSVPM NPADFLLDLA NGLTSDGEDA 840 NESIDDHMQS IVVAYRERLS EKLKAELAED KLSDGAEDNT KQEFGRWPTT WWQQFSVLLR 900 RGVRERKHGS FALLKIIEVL AVSLLTALLW WKSHISHLQD QTFLLFHVKE IVSDLPMELV 960 LPTLFLTIKY WCTGLKPTVG HFLHALLVLL LGVSVAQGLG LALGALVMDH ELAMTLGTVF 1020 MLSFQLVGGF FVQQVPRFIA WLKYLSFVHY SYKLLLGSQY KADETYPCDN GGVCVIADYP 1080 SIKMVGLDGQ LISVIALVIM LVGYRLIAYV ALMRIGVTRK * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00197 | PLN00197 | 2.0e-91 | 75 | 443 | 370 | + beta-amylase; Provisional | ||
| PLN02801 | PLN02801 | 2.0e-92 | 77 | 443 | 368 | + beta-amylase | ||
| PLN02803 | PLN02803 | 2.0e-96 | 55 | 443 | 396 | + beta-amylase | ||
| PLN03211 | PLN03211 | 2.0e-147 | 564 | 1115 | 651 | + ABC transporter G-25; Provisional | ||
| PLN02161 | PLN02161 | 0 | 3 | 515 | 532 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0005524 | ATP binding |
| GO:0016020 | membrane |
| GO:0016161 | beta-amylase activity |
| GO:0016887 | ATPase activity |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1b1y_A | 0 | 77 | 443 | 6 | 359 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 1wdr_A | 0 | 77 | 443 | 12 | 365 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1q6d_A | 0 | 77 | 443 | 12 | 365 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 1v3i_A | 0 | 77 | 443 | 12 | 365 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 2xgi_A | 0 | 77 | 443 | 10 | 363 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
