| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna16368.1-v1.0-hybrid |
| Family | GH5 |
| Protein Properties | Length: 499 Molecular Weight: 56591.4 Isoelectric Point: 8.0431 |
| Chromosome | Chromosome/Scaffold: 1 Start: 18926646 End: 18929067 |
| Description | |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 212 | 485 | 1.69557e-43 |
| MQDHWNSYITEDDFKFMSSRGLNAVRIPVGWWIAYDPKPPKPFVGGSLKALDNAFIWSQKYELNVIIELHAVQGSQNGLDHSGTRDGHLEFGDSHIPDTL KVIDFLAARYAKNPALGAIELMNEPWAPLVTLDTLKKYYKAGYDAVRKHTSSAYVMLANRLGPADSKELLSFAQGLKKVVIDVHYYSMYIDMFKDFSAQQ HIDFIYNQRGSDLAAVNISNGPLTYVGEWVAEWGINGAYKQDYQRFAKAQLDVYGRATFGWAYWSYKCENDHWS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 499 Download |
| MSYFFSLAVY LSCFASLCSA QKLKLPLKSV NLGNWLVVEG WMKPSLFDGI PNKDLLDGTK 60 VQLKSTKLHK YLGAEDGGDS VVVINRTSAS DWETFRLWRI DENSFNFRVT KKKFMGLSRK 120 ETNRIVAVQD QPGDKETFQI VRKEGKPNRI RIQASNGLFL QAKSDTELTA DYEGSGWDDS 180 NPSVFDMIIV GSLKGEYQMT NGYGPDKAPK VMQDHWNSYI TEDDFKFMSS RGLNAVRIPV 240 GWWIAYDPKP PKPFVGGSLK ALDNAFIWSQ KYELNVIIEL HAVQGSQNGL DHSGTRDGHL 300 EFGDSHIPDT LKVIDFLAAR YAKNPALGAI ELMNEPWAPL VTLDTLKKYY KAGYDAVRKH 360 TSSAYVMLAN RLGPADSKEL LSFAQGLKKV VIDVHYYSMY IDMFKDFSAQ QHIDFIYNQR 420 GSDLAAVNIS NGPLTYVGEW VAEWGINGAY KQDYQRFAKA QLDVYGRATF GWAYWSYKCE 480 NDHWSLKWMI ENDYIKIK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 0.0007 | 59 | 176 | 118 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 5.0e-12 | 215 | 477 | 277 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 3.0e-26 | 178 | 482 | 342 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 1e-39 | 182 | 492 | 26 | 375 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 3o6a_A | 2e-39 | 182 | 492 | 31 | 380 | A Chain A, F144yF258Y DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans At 2 A |
| PDB | 2pc8_A | 2e-39 | 182 | 492 | 32 | 381 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
