Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna18381.1-v1.0-hybrid |
Family | GT14 |
Protein Properties | Length: 417 Molecular Weight: 47017.9 Isoelectric Point: 9.1536 |
Chromosome | Chromosome/Scaffold: 6 Start: 5060537 End: 5062793 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 72 | 322 | 0 |
FAYLLTGSKGEGPQLKRLLQAAYHPRNHYLLHLDLEASDAERLDLAKYVKSESVMHAFRNAMVVGAADLVTAKGPTVMAATLHAVAILLKRAGDWDWFIN LSASDYPLMSQDDLLHIFSYLPRDLNFLEHTSNIGWKENQRARPIIIDPGLYHNKKSGVFWAKERRSMPASFKLFMGSTGVVLTRSFLEFCILGWDNLPR TLLMYYTNFLQSPEGYFHTVICNHKDYQNTTVNHDLHYIRWDSPPKLNPVN |
Full Sequence |
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Protein Sequence Length: 417 Download |
MKRTSNNQSQ WLVILTATSA LLLLALLALT LTHAKHSSSA ADYDHRRFAN PDHNFIDGDN 60 SYGLELPRLP RFAYLLTGSK GEGPQLKRLL QAAYHPRNHY LLHLDLEASD AERLDLAKYV 120 KSESVMHAFR NAMVVGAADL VTAKGPTVMA ATLHAVAILL KRAGDWDWFI NLSASDYPLM 180 SQDDLLHIFS YLPRDLNFLE HTSNIGWKEN QRARPIIIDP GLYHNKKSGV FWAKERRSMP 240 ASFKLFMGST GVVLTRSFLE FCILGWDNLP RTLLMYYTNF LQSPEGYFHT VICNHKDYQN 300 TTVNHDLHYI RWDSPPKLNP VNLTLEHYND IIQAGAPLAG PFTRDDPVLD KIDKELLGRP 360 SGHLTPGGWC LGRVGKDRCS VYGNPVAVKP SVVSKRLEKL IVKLLDSENF RSKQCK* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 1.0e-69 | 72 | 332 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 5.0e-170 | 65 | 416 | 352 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000002 | 86 | 292 | 99 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000002 | 86 | 292 | 99 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000002 | 86 | 292 | 99 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000002 | 86 | 292 | 99 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00000006 | 86 | 292 | 99 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |