Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna27346.1-v1.0-hybrid |
Family | GT20 |
Protein Properties | Length: 941 Molecular Weight: 106204 Isoelectric Point: 6.6697 |
Chromosome | Chromosome/Scaffold: 3 Start: 24510378 End: 24517878 |
Description | trehalose-6-phosphate synthase |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT20 | 82 | 567 | 0 |
RQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDDIGQQALTKALAEKVIVVELSNITVSPVNSPQRCIPVFLDEEIV HQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFSAYKKANQMFADVVNAHYEEGDVVWCHDYHLMFLPKCLKEYNSKMKVGWFLHTPFPSSEIHRT LPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALEVPQVQEHIRELKERFAGRKVMLGVDRLDM IKGIPQKILAFEKFLEENPIWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTAVPIHHLDRSLDFHALCALYAVTDVVLVTSLRDGMNL VSYEYVACQDAKRGVLILSEFAGAAQSLGAGAILVNPWNITEVANSIAQALNMSSEEREKRHRHNFLHVTTHTAQEWAETFVSELN |
Full Sequence |
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Protein Sequence Length: 941 Download |
MPGNKYNSNS AHIPNRVERL LRVRELRKNN RASSQLNEAN DNNSEKEEES SRNSYFEKYL 60 DGAAAVRALN EGPENQEARP LRQRLLVVAN RLPVSAVRRG EDSWSLEISA GGLVSALLGV 120 KEFEARWIGW AGVNVPDDIG QQALTKALAE KVIVVELSNI TVSPVNSPQR CIPVFLDEEI 180 VHQYYNGYCN NILWPLFHYL GLPQEDRLAT TRSFQSQFSA YKKANQMFAD VVNAHYEEGD 240 VVWCHDYHLM FLPKCLKEYN SKMKVGWFLH TPFPSSEIHR TLPSRSELLR SVLAADLVGF 300 HTYDYARHFV SACTRILGLE GTPEGVEDQG RLTRVAAFPI GIDSDRFIRA LEVPQVQEHI 360 RELKERFAGR KVMLGVDRLD MIKGIPQKIL AFEKFLEENP IWRDKVVLLQ IAVPTRTDVP 420 EYQKLTSQVH EIVGRINGRF GSLTAVPIHH LDRSLDFHAL CALYAVTDVV LVTSLRDGMN 480 LVSYEYVACQ DAKRGVLILS EFAGAAQSLG AGAILVNPWN ITEVANSIAQ ALNMSSEERE 540 KRHRHNFLHV TTHTAQEWAE TFVSELNDTV VEAQLRTRQV PPPLPNREAI QRYLRANNRL 600 LILGFNATLT EPVDTPERRG DQIKEMELKL HPDLIEPLTA LCNDPNTTIV VLSGSDRNVL 660 DDNFGELDMW LAAENGMFLR ATKGQWMTTM PEHLNMEWVE SVKHVFEYFT ERTPRSHFEL 720 RETSLVWNYK YADVDFGRLQ ARDMLQHLWT GPISNASVDV VQGSRSVEVR AVGVTKGAAI 780 DRILGEIVHS KSMTSPIDYV LCMGHFLGKD EDVYTFFEPD LSTDNNGLPR SKITDGLRSS 840 GERRSSPKLL ANKSGSKSSQ NKTQRPLPNP EKKAAVNHKS GNVRSPSPDK ISWNVLDLKK 900 ENYYSCSVGR TRTNARYLLQ SSDDVVSFLK ELADASSDFE * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03064 | PLN03064 | 0 | 55 | 940 | 889 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PLN03063 | PLN03063 | 0 | 77 | 937 | 861 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
TIGR02400 | trehalose_OtsA | 0 | 84 | 568 | 486 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. | ||
PRK14501 | PRK14501 | 0 | 84 | 804 | 725 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2wtx_D | 0 | 84 | 578 | 3 | 466 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2wtx_C | 0 | 84 | 578 | 3 | 466 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2wtx_B | 0 | 84 | 578 | 3 | 466 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2wtx_A | 0 | 84 | 578 | 3 | 466 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 1uqu_B | 0 | 84 | 578 | 3 | 466 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
Sequence Alignments (This image is cropped. Click for full image.) |
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