Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna27498.1-v1.0-hybrid |
Family | GH27 |
Protein Properties | Length: 774 Molecular Weight: 86323.9 Isoelectric Point: 7.6088 |
Chromosome | Chromosome/Scaffold: 2 Start: 897160 End: 907570 |
Description | alpha-galactosidase 1 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 246 | 322 | 4.2e-26 |
EYARPGGWNDPDMLEVGNGGMTKDEYVVHFSIWAISKAPLLLGCDVRNMSKDTLEIVANKEVISVNQDPLGVQAKKV | |||
GH27 | 146 | 242 | 4.7e-32 |
MPGSLGHEEQDANTFAAWGIDYLKYDNCYNDGSNPTVRYPVMTRALMKAGRPIFFSLCEWGDMHPALWGAKLGNSWRTTKDISDSWESMVSRADMNE |
Full Sequence |
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Protein Sequence Length: 774 Download |
MRKKAVPTTM IVMAVILCLF KLMGVSASHL RRNLLANGLG VTPPMGWNSW NHFNCRIEEK 60 TIKETADALV STGLSKLGYT YVNIENFHFL KDDCWAEIAR DVKGNLVAKK SAFPSGIKAL 120 VDYVHSKGLK IGIYSDAGYF TCSKTMPGSL GHEEQDANTF AAWGIDYLKY DNCYNDGSNP 180 TVRYPVMTRA LMKAGRPIFF SLCEWGDMHP ALWGAKLGNS WRTTKDISDS WESMVSRADM 240 NEVYAEYARP GGWNDPDMLE VGNGGMTKDE YVVHFSIWAI SKAPLLLGCD VRNMSKDTLE 300 IVANKEVISV NQDPLGVQAK KVRLEGDLEI WAGPLSGYRV ALLLINQGPE NNTITAQWED 360 IGLPPNTVVE ARDLWEHKTL KKLFVGNLTA SVNSHACKMN RNKNLSEKTG ERHIQAVPQP 420 PAIEGDGIET LPFLLRRFSA AEAHTQSRSV QLLLPGPQIP QRQAPDASPD KPRGKRITAS 480 EMKRSCTVAL DSVNVSKNRY TDVLPFDQNR VVLNSCKDYR PEARGYINAS FISACSSGNI 540 SRFIATQGPL PHTYEDFWEM VLENRCPVVV MLTRLVDYHR MVKCGDYFQA EDGPREFGNI 600 TLSTKWIRTT GNSIALRLLE VNSKESEEPP ISVLHIQYPE WPDHGVPTDT IAVREILKTI 660 YQVPPDLGPV VVHCSAGIGR TGTYCTIHNT IQRILSGDMS ALDLANTITT FRTERIGMVQ 720 TLEQYFFCYS AIIDELEDLM ANLNGERSLK RVPCCYRIPT RLATKLILVA SAR* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00194 | PTPc | 4.0e-86 | 483 | 734 | 254 | + Protein tyrosine phosphatase, catalytic domain. | ||
cd00047 | PTPc | 3.0e-89 | 497 | 734 | 240 | + Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr (pTyr) residues, instead of pSer or pThr. This family has a distinctive active site signature motif, HCSAGxGRxG. Characterized as either transmembrane, receptor-like or non-transmembrane (soluble) PTPs. Receptor-like PTP domains tend to occur in two copies in the cytoplasmic region of the transmembrane proteins, only one copy may be active. | ||
PLN02229 | PLN02229 | 1.0e-177 | 35 | 399 | 368 | + alpha-galactosidase | ||
PLN02692 | PLN02692 | 0 | 27 | 399 | 373 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 0 | 30 | 399 | 370 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004725 | protein tyrosine phosphatase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0006470 | protein dephosphorylation |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 35 | 399 | 1 | 356 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 37 | 399 | 3 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 35 | 399 | 1 | 381 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 35 | 399 | 1 | 381 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3lrl_A | 0 | 10 | 392 | 4 | 408 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |