Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna30610.1-v1.0-hybrid |
Family | GH17 |
Protein Properties | Length: 389 Molecular Weight: 42409.6 Isoelectric Point: 6.2864 |
Chromosome | Chromosome/Scaffold: 3 Start: 1832950 End: 1834490 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 29 | 346 | 0 |
LGINYGQLGNNLLEPQKVLDLLSSLKVTKARIYDTNPQVLTAFANSGVELMVTIENAMLGQLMNPQAALQWVNAHIKPYVPATKITSIAVGNEVFTDDDT TVLLANLVPAMVGIQTALTQLGLDSYIKVSTPCSLAVLEESYPPSAGSFKTEVAGVMSQLLQFLQTTKAPFWINAYPYFAYKDNPNKISLDYVLFNPNSG MIDPYTKLHYDNMLYAQVDAAIFAMARLGFNGIEVKVSETGWPSKGDANEIGATLQNAAIYNRNLLRRQLANEGTPLRPRMRLEVYVFALFNEDMKPGPT SERNYGLFQPDGTMAYNV |
Full Sequence |
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Protein Sequence Length: 389 Download |
MAISSRIARI NAFLLCLLCF SALQGVTSLG INYGQLGNNL LEPQKVLDLL SSLKVTKARI 60 YDTNPQVLTA FANSGVELMV TIENAMLGQL MNPQAALQWV NAHIKPYVPA TKITSIAVGN 120 EVFTDDDTTV LLANLVPAMV GIQTALTQLG LDSYIKVSTP CSLAVLEESY PPSAGSFKTE 180 VAGVMSQLLQ FLQTTKAPFW INAYPYFAYK DNPNKISLDY VLFNPNSGMI DPYTKLHYDN 240 MLYAQVDAAI FAMARLGFNG IEVKVSETGW PSKGDANEIG ATLQNAAIYN RNLLRRQLAN 300 EGTPLRPRMR LEVYVFALFN EDMKPGPTSE RNYGLFQPDG TMAYNVGLSA LSTTSTTSST 360 STASISDITS SATKILNDLQ EQKHKNQK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0007 | 261 | 325 | 66 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-94 | 29 | 346 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 29 | 346 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 29 | 349 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 29 | 349 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 29 | 349 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 29 | 349 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |