| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna31360.1-v1.0-hybrid |
| Family | GT48 |
| Protein Properties | Length: 1554 Molecular Weight: 178725 Isoelectric Point: 7.0645 |
| Chromosome | Chromosome/Scaffold: 5 Start: 14574896 End: 14590758 |
| Description | glucan synthase-like 4 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT48 | 818 | 1064 | 0 |
| IPSNLEARRRISFFATSLFMNMPGAPKVANMVPFSVMTPHYLEDINFSKEELHSSQREVSIIFYMQKIFPDEWKNFLERMGYENLDELERDKQEELRNWA SFRGQTLSRTVRGMMYYREALKLQAFLDMAEDEDILEGYDAVESRNHPLSAQLDALADMKFTYVVTCQLYPSLRVAYVEEKEEIVDNKPHKVYSSVLVKA IPDFGDQEIYRIKLPGPPTIGEGKPENQNHGIIFTRGEALQTIDMNQ | |||
| GT48 | 1109 | 1320 | 0 |
| GLNQISKFEAKVANGNSEQTISRDIFRLGRQFDFFRMLSCYFTTIGFYFSSLISVIGIYVFLYGQLYLVLSGLEKALVIEARLQNIQSLETALASQSFIQ LGLLTGMPMVMEIGLEKGFLNALKDFVLMQLQLASVFFTFSFGTKIHYYGRTIMHGGAKYRPTGRKVVVFHTSFTENYRLYSRSHFVKGFELLLLLIVYD LFRRSYESSMAW | |||
| Full Sequence |
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| Protein Sequence Length: 1554 Download |
| MSEIVVAEPI YDGGAEEKRP ITRYLTMGSG SDHNHVPEPF ESERLPATLA SKIQSFLRVA 60 NLIESEEPRI AYLCRFHAFE IAHNMDRHSN GRGVRQFKTT LLQRLEQDEE TTFRKRKEKS 120 DIRELRRVYH AYKEYIIKHE GAFNTENSHR EKLINARIIG SVLFEVLKTV SNTAGPQALA 180 NRGGIQTKPN DLFGIYNILP LDQGGAQQAI MQLPEIKAAV AAIRHIRGIP SNEDFQKHGN 240 FIDLFDFLQY CFGFQEGNVA NQREHLLLLL ANIHRRKTQK QTSVSKMAYE LHGMLTGAVS 300 LTTWEKVMPA YGGQSESFLN NVVTPIYGVI REEAKKSKGG TADHSTWRNY DDLNEYFWSP 360 DCFEIGWPMH LDHDFFCIHS PKKSNAKKAS ASTAPVEERR KEDGEEDEVG VTKEEVREPK 420 WLGKTNFVEV RSFWQIFRSF DRMWSFFIVS LQALIIMACH EVESPLQLFD KVIFEDIMSI 480 FITSAFLKFI QVAIYLMTNA VEMVLFLVPS VRKYIEISNY RICTILSWWT QVYFMDTQIW 540 YSVFCTIFGG VYGILHHLGE SLSFQVSKSE KNGLAKFVLV WNQIINSFRL EDLINNRELD 600 LMTMPMSSEL FSGIVRWPVF LLANKFSTAL SIAKDFVGRD ESLIRKLKKD EYMYCAVKEC 660 YESLKYVLEI LIIGDLEKRI VSAILTEIEK SIAKSSLLED FRMIKVPDLL AKCIELIELL 720 VEGNEDHHGK VAKVLQDIFE LVTNDMMTSG FRILELLDSS QQTETDSAYF SGNIESPLFG 780 SAGGRNSIHF PLPDSAALNE QIKRFLLLLT VQDTAMDIPS NLEARRRISF FATSLFMNMP 840 GAPKVANMVP FSVMTPHYLE DINFSKEELH SSQREVSIIF YMQKIFPDEW KNFLERMGYE 900 NLDELERDKQ EELRNWASFR GQTLSRTVRG MMYYREALKL QAFLDMAEDE DILEGYDAVE 960 SRNHPLSAQL DALADMKFTY VVTCQLYPSL RVAYVEEKEE IVDNKPHKVY SSVLVKAIPD 1020 FGDQEIYRIK LPGPPTIGEG KPENQNHGII FTRGEALQTI DMNQGFCKCI MVPYIFLHTA 1080 VYLLLHGSCL IKRPALSPLV KGFLPILSGL NQISKFEAKV ANGNSEQTIS RDIFRLGRQF 1140 DFFRMLSCYF TTIGFYFSSL ISVIGIYVFL YGQLYLVLSG LEKALVIEAR LQNIQSLETA 1200 LASQSFIQLG LLTGMPMVME IGLEKGFLNA LKDFVLMQLQ LASVFFTFSF GTKIHYYGRT 1260 IMHGGAKYRP TGRKVVVFHT SFTENYRLYS RSHFVKGFEL LLLLIVYDLF RRSYESSMAW 1320 DKIVDDWKDW NKWIRQQGGI GVQQEKSWQS WWIDEQDHLR HSGMTSRLFE ILLSVRFFLY 1380 QYGLVYHLDI SQNSTNFLVY LLSWIVILVV FLLVKAVNLG RQQFSARYHL VFRLFKATLF 1440 LGVLSIIISL SLVCHLSWRD LVVCCLAFLP TGWGLILFAQ AVRPLIENTG LWEFTRVLAK 1500 TYDYGMGVVL FAPIAVLAWL PIISAFQTRF LFNEAFNRHL QIQPILQGKK KNR* 1560 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04652 | DUF605 | 8.0e-5 | 51 | 108 | 58 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
| pfam14288 | FKS1_dom1 | 8.0e-30 | 286 | 369 | 85 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 6.0e-53 | 1109 | 1431 | 385 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| pfam02364 | Glucan_synthase | 1.0e-56 | 818 | 1064 | 304 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Transmembrane Domains | |
|---|---|
 | |
| Start | End |
| 489 | 511 |
| 539 | 558 |
| 1069 | 1091 |
| 1153 | 1175 |
| 1236 | 1258 |
| 1397 | 1419 |
| 1434 | 1456 |
| 1461 | 1482 |
| 1504 | 1526 |
| Hydropathy |
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