| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g037020m |
| Family | AA7 |
| Protein Properties | Length: 313 Molecular Weight: 36496.7 Isoelectric Point: 5.4797 |
| Chromosome | Chromosome/Scaffold: 03333 Start: 8007 End: 8978 |
| Description | FAD-binding Berberine family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA7 | 5 | 101 | 1.1e-24 |
| RESMGEDLFWAIRGGGGPSFGIIISWKIELVDVPSTVTVFAIPRTLEQNATKLLHKWQYIADRVHEDLFISPFLYRANSTMVCLFTSLFLGGVDRLL | |||
| Full Sequence |
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| Protein Sequence Length: 313 Download |
| RFLNRESMGE DLFWAIRGGG GPSFGIIISW KIELVDVPST VTVFAIPRTL EQNATKLLHK 60 WQYIADRVHE DLFISPFLYR ANSTMVCLFT SLFLGGVDRL LPLMQESFPE LGLTQEDCRE 120 MSFIESVVYI NGFEIREFIK RFFKGKADYV IEPIPKEAFE GLYDLFYEED PRTYGLLVFF 180 PYGGKMSEIS ESEIPFPHRA GNRYTLLYYA EWQDATNEAS QRHKNMLNKL FNYMNPYVTK 240 NPRTAYINYR DLDIGTNNKL GDTSVQEASV WGKKYFKNNF YRLVHVKTMV DPENFFRNEQ 300 SIPPFNLLKD EL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam08031 | BBE | 2.0e-16 | 245 | 303 | 59 | + Berberine and berberine like. This domain is found in the berberine bridge and berberine bridge- like enzymes which are involved in the biosynthesis of numerous isoquinoline alkaloids. They catalyze the transformation of the N-methyl group of (S)-reticuline into the C-8 berberine bridge carbon of (S)-scoulerine. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002299045.1 | 0 | 1 | 306 | 211 | 531 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330609.1 | 0 | 1 | 306 | 211 | 532 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330610.1 | 0 | 1 | 306 | 211 | 531 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002332196.1 | 0 | 1 | 306 | 203 | 525 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002333020.1 | 0 | 1 | 306 | 211 | 531 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vte_A | 0 | 1 | 305 | 188 | 513 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
| PDB | 4dns_B | 0 | 1 | 305 | 191 | 496 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 4dns_A | 0 | 1 | 305 | 191 | 496 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3tsj_B | 0 | 1 | 305 | 189 | 496 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3tsj_A | 0 | 1 | 305 | 189 | 496 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DT214485 | 287 | 39 | 313 | 0 |
| CX670244 | 282 | 1 | 270 | 0 |
| CX299253 | 223 | 29 | 240 | 0 |
| EY874628 | 219 | 107 | 313 | 0 |
| DC894588 | 324 | 1 | 305 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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