| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g039106m |
| Family | CE8 |
| Protein Properties | Length: 346 Molecular Weight: 38335.9 Isoelectric Point: 9.0606 |
| Chromosome | Chromosome/Scaffold: 00017 Start: 482087 End: 483832 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 72 | 201 | 1.3e-39 |
| RLGNFVTVQKAINSLPVINLCRVVIFISAGTYREKVEIPTTMAYITMIGAGADNTVIEWDDTADRMGQSGRPLGTYASATFAVNSPYFIAKNITFKNKAP LPPSGALGKQAVAFRISADTAAFTGCKFIG | |||
| CE8 | 201 | 336 | 0 |
| GSVDFIFGNGLSFYEDCHLHAITNSYGALTAQKRGSLLEETGFSFVKCKVTGSGALYLGRAWGTFSRVVFAYTYMDKIITPRGWYDWGDKNREMTVFYGQ YKCSGPGAYYGGRVSWSRELTQEEAEPFISVEFIDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 346 Download |
| MLLKLFLLAL LLERTSSWVA SDESNDLAVV EQGDLNWVNF KQHALHLNHS LFQKAKNKFK 60 PCKTIKVNKN PRLGNFVTVQ KAINSLPVIN LCRVVIFISA GTYREKVEIP TTMAYITMIG 120 AGADNTVIEW DDTADRMGQS GRPLGTYASA TFAVNSPYFI AKNITFKNKA PLPPSGALGK 180 QAVAFRISAD TAAFTGCKFI GSVDFIFGNG LSFYEDCHLH AITNSYGALT AQKRGSLLEE 240 TGFSFVKCKV TGSGALYLGR AWGTFSRVVF AYTYMDKIIT PRGWYDWGDK NREMTVFYGQ 300 YKCSGPGAYY GGRVSWSREL TQEEAEPFIS VEFIDGHQWL PSHSL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02671 | PLN02671 | 6.0e-94 | 56 | 340 | 308 | + pectinesterase | ||
| PLN02432 | PLN02432 | 4.0e-94 | 74 | 340 | 288 | + putative pectinesterase | ||
| PLN02665 | PLN02665 | 2.0e-94 | 63 | 340 | 301 | + pectinesterase family protein | ||
| PLN02634 | PLN02634 | 4.0e-99 | 74 | 340 | 289 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 0 | 20 | 341 | 343 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI17409.1 | 0 | 1 | 340 | 4 | 361 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002266952.1 | 0 | 1 | 340 | 2 | 359 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310842.1 | 0 | 35 | 340 | 11 | 336 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330522.1 | 0 | 31 | 340 | 52 | 379 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002531506.1 | 0 | 16 | 340 | 18 | 364 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 6e-40 | 74 | 345 | 17 | 313 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 3e-30 | 74 | 342 | 13 | 306 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 4e-18 | 67 | 328 | 35 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.000002 | 76 | 342 | 18 | 340 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.000002 | 76 | 342 | 18 | 340 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
