| Basic Information | |
|---|---|
| Species | Citrus sinensis |
| Cazyme ID | orange1.1g046057m |
| Family | CBM53 |
| Protein Properties | Length: 1199 Molecular Weight: 136767 Isoelectric Point: 7.7231 |
| Chromosome | Chromosome/Scaffold: 00007 Start: 1803026 End: 1811733 |
| Description | starch synthase 3 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM53 | 276 | 359 | 2.5e-30 |
| QDIEVFLNRSLSTLKNEPDVLIMGAFNDWRWKSFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNGQNIYENNDQKDFCIAV | |||
| CBM53 | 612 | 700 | 4.2e-32 |
| GTTVTVFYNPANTVLNGKSEIWFRCSFNHWTHRMGILPPQKMVPVKYSTHVKTTVKVPLDAYTMDFVFSEWEDGGTFDNKNGMDYHIPV | |||
| CBM53 | 452 | 540 | 1.4e-34 |
| LVRLYYNKQSSSLAHAKELWIHGGYNNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFADGPPGKAIVYDNNSRQDFHAIV | |||
| GT5 | 711 | 1194 | 0 |
| HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVYFLEPQNGFFSKGCVYGCNND KERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHK FYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFV NLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGV DYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYR | |||
| Full Sequence |
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| Protein Sequence Length: 1199 Download |
| MAAAGLQLQS SVSCRAVSQE RSLFKFKPST GSSAFVKTTQ FCFFFIEFAY LLIFYLKSHY 60 FSRRRQRGVS TPRTKDTGSK GFTPKTPVGT GIQKRDQKKN GDKEGSGTPV SGEYGGPTKK 120 TPAPTNGVEK KPAVELSRDN QIGEQNVDIT EQESENIPRT NKDLISAKSS QVVGNGSVGR 180 IDDVFQKKET TPKSDIKNVT EKSTSKRKHL NLNKSNDSVR DESIKADIKA SEDASLKLKK 240 EVEENLRKQE IERLADENFL RQKKIFVYPQ VVKPDQDIEV FLNRSLSTLK NEPDVLIMGA 300 FNDWRWKSFT FRLNKTHLKG DWWSCQVHVP KEAFKIDFVF FNGQNIYENN DQKDFCIAVE 360 GLMDALAFED FLLEEKRREQ EKLAKEKAEQ ERQEEERRRI EAEHAAIEAD RAQARVETER 420 KREMLRELKK KAARSVDNVW YIEPSEFKGE DLVRLYYNKQ SSSLAHAKEL WIHGGYNNWK 480 DGLSIVARLV SSERTDGDWW YAKVSVPDQA LVLDWVFADG PPGKAIVYDN NSRQDFHAIV 540 PKSIPDELYW VEEERQTFRK LQEERRLKEE AARAKAEKTA HMKAETKERT LKRFLLSQKH 600 IVYTDPLDVQ AGTTVTVFYN PANTVLNGKS EIWFRCSFNH WTHRMGILPP QKMVPVKYST 660 HVKTTVKVPL DAYTMDFVFS EWEDGGTFDN KNGMDYHIPV FGGVVKEPPM HIVHIAVEMA 720 PIAKVGGLGD VVTSLSRTVQ DLNHNVDIIL PKYDCLKFSD VKDLGYNRSY HWGGTEIKVW 780 FGKVEGLSVY FLEPQNGFFS KGCVYGCNND KERFAFFCHA ALEFLLQGGF HPDIIHCHDW 840 SSAPVAWLFK DHYVHYGLSK ARIVFTIHNL EFGTHHIGKA MTYADKATTV SHTYSKEVAG 900 DPAIAPHLHK FYGILNGIDQ DMWDPFNDKF IPVSYTSENL VEGKRAAKEA LQQKVGLRKS 960 DLPLVGIITR LTHQKGIHLI KHAIWRTLDR GGQVVLLGSA PDPRIQNDFV NLANELHSSH 1020 ADRARLCLTY DEPLSHLIYA GADFILVPSI FEPCGLTQLV AMRYGSIPVV RKTGGLYDTV 1080 FDVDHDKERA QALDLEPNGF SFDGADIAGV DYALNSIHVS SFHTTSRLYI YEDLEGQPLM 1140 IPFKQKQSSM TYDSFRAISA YYDGREWLNS LCKTVMEQDW SWNRPALDYM ELYRAARK* 1200 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02939 | PLN02939 | 3.0e-138 | 710 | 1196 | 533 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 6.0e-147 | 710 | 1196 | 529 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PRK00654 | glgA | 4.0e-160 | 710 | 1198 | 526 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 4.0e-170 | 711 | 1194 | 529 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PLN02316 | PLN02316 | 0 | 69 | 1198 | 1131 | + synthase/transferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| GO:2001070 | starch binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACT09059.1 | 0 | 6 | 1198 | 5 | 1228 | starch synthase III precursor [Solanum lycopersicum] |
| GenBank | ACT83376.1 | 0 | 8 | 1198 | 7 | 1228 | soluble starch synthase [Solanum tuberosum] |
| EMBL | CAA64173.1 | 0 | 8 | 1198 | 7 | 1228 | soluble-starch-synthase [Solanum tuberosum] |
| RefSeq | XP_002269011.1 | 0 | 4 | 1198 | 3 | 1140 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002518476.1 | 0 | 69 | 1198 | 1 | 1058 | starch synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 710 | 1152 | 1 | 469 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 710 | 1152 | 1 | 469 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 710 | 1152 | 1 | 469 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 710 | 1152 | 1 | 469 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 710 | 1152 | 1 | 469 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
