PUL ID |
PUL0096 |
PubMed |
31275257, Front Microbiol. 2019 Jun 7;10:1286. doi: 10.3389/fmicb.2019.01286. eCollection 2019. |
Characterization method |
fosmid library screen,lectin binding assay |
Genomic accession number |
LR131286.1 |
Nucelotide position range |
29-34237 |
Substrate |
O-glycan,N-glycan |
Loci |
VDS02706.1-VDS02727.1 |
Species |
uncultured bacterium/77133 |
Degradation or Biosynthesis |
degradation |
Cluster number |
1 | ||
Gene name |
Gene position |
Gene type |
Found by CGCFinder? |
- | 30 - 1853 (+) | TC: gnl|TC-DB|Q45780|1.B.14.6.1 | Yes |
- | 1884 - 3398 (+) | TC: gnl|TC-DB|Q5LEN2|8.A.46.1.4 | Yes |
- | 3526 - 5166 (+) | CAZyme: GH33 | Yes |
- | 5215 - 7176 (+) | CAZyme: GH20 | Yes |
- | 7178 - 7843 (+) | other | Yes |
- | 7840 - 9909 (+) | other | Yes |
- | 9977 - 12562 (+) | CAZyme: GH2 | Yes |
- | 12590 - 14902 (+) | CAZyme: GH20 | Yes |
- | 15033 - 16058 (+) | other | Yes |
- | 16055 - 18115 (+) | CAZyme: GH20 | Yes |
- | 18122 - 20374 (+) | CAZyme: GH92 | Yes |
- | 20383 - 22887 (+) | CAZyme: GH2 | Yes |
- | 23135 - 24229 (+) | CAZyme: CE9 | Yes |
- | 24453 - 25106 (-) | TC: gnl|TC-DB|Q18BL2|3.A.1.124.6 | Yes |
- | 25411 - 25533 (-) | other | Yes |
- | 25671 - 26342 (-) | other | Yes |
- | 26734 - 27579 (+) | TF: DBD-Pfam|HTH_AraC,DBD-Pfam|HTH_AraC,DBD-SUPERFAMILY|0035607,DBD-SUPERFAMILY|0035607 | Yes |
- | 27809 - 28384 (+) | other | Yes |
- | 28741 - 29355 (+) | other | Yes |
- | 29406 - 30887 (+) | CAZyme: GH29 | Yes |
- | 30978 - 32897 (-) | CAZyme: GH97 | Yes |
- | 32921 - 34237 (-) | CDS | No |
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