PUL ID |
PUL0103 |
PubMed |
31275257, Front Microbiol. 2019 Jun 7;10:1286. doi: 10.3389/fmicb.2019.01286. eCollection 2019. |
Characterization method |
fosmid library screen,lectin binding assay |
Genomic accession number |
LR131282.1 |
Nucelotide position range |
26-32565 |
Substrate |
O-glycan,N-glycan |
Loci |
VDS02584.1-VDS02614.1 |
Species |
uncultured bacterium/77133 |
Degradation or Biosynthesis |
degradation |
Cluster number |
1 | ||
Gene name |
Gene position |
Gene type |
Found by CGCFinder? |
- | 156 - 977 (+) | CDS | No |
- | 992 - 1972 (-) | CDS | No |
- | 1963 - 2973 (-) | CDS | No |
- | 2978 - 3880 (-) | TC: gnl|TC-DB|Q8L725|2.A.4.7.2 | Yes |
- | 4029 - 6179 (+) | other | Yes |
- | 6259 - 6390 (-) | other | Yes |
- | 6479 - 7384 (+) | other | Yes |
- | 7605 - 8750 (-) | other | Yes |
- | 8792 - 9601 (-) | other | Yes |
- | 9628 - 10638 (-) | TC: gnl|TC-DB|P27125|2.A.7.6.1 | Yes |
- | 10704 - 11957 (-) | other | Yes |
- | 11964 - 13442 (-) | other | Yes |
- | 13469 - 13630 (+) | other | Yes |
- | 13605 - 14498 (+) | TF: DBD-Pfam|HTH_AraC,DBD-Pfam|HTH_AraC,DBD-SUPERFAMILY|0036286,DBD-SUPERFAMILY|0035607 | Yes |
- | 14579 - 17995 (-) | CAZyme: CBM67|GH78 | Yes |
- | 18530 - 18850 (+) | CDS | No |
- | 18876 - 19745 (+) | CDS | No |
- | 19774 - 20346 (+) | CDS | No |
- | 20396 - 21010 (+) | CDS | No |
- | 21022 - 21474 (+) | CDS | No |
- | 21489 - 21731 (+) | CDS | No |
- | 21738 - 21947 (+) | TF: DBD-Pfam|HTH_3,DBD-SUPERFAMILY|0043143 | No |
- | 22010 - 23218 (-) | TF: DBD-Pfam|MarR,DBD-SUPERFAMILY|0043935 | No |
- | 23572 - 24600 (+) | CDS | No |
- | 24692 - 25609 (+) | CDS | No |
- | 25620 - 26804 (+) | CDS | No |
- | 26894 - 28081 (+) | CDS | No |
- | 28164 - 28547 (+) | CDS | No |
- | 28563 - 30185 (+) | CAZyme: GH33 | No |
- | 30409 - 30945 (-) | CDS | No |
- | 31002 - 31418 (-) | TF: DBD-Pfam|HTH_11,DBD-SUPERFAMILY|0039939 | No |
Copyright 2020 © YIN LAB, UNL. All rights reserved. Designed by Catie Ausland and Jinfang Zheng. Maintained by Yanbin Yin.