Results - Acr-Aca DB

Anti-CRISPR Results - GCF_000019485.1 (Total 3 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Show entries

Search:

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Synechococcus sp. PCC 7002	NC_010475.1	WP_012305770.1	131288	131704	-	139	2	8.477	WP_081808555.1\|HTH_31\|AcrIIA9\|30.0\|1.8e-07	0.133688803	1640	-5.360223	Not found in Prophage	Not found in Prophage	-	-	MVTADYGLKIGTVAQQSGLPVKTIRYYADLGLLSTVMGRSPKGYRLFSAAVFARLAFIKRAQSLGLSLEDIGKILTVRDQGTLPCGVIRELLEAQLQEINQQMAALTILKGELQGILSGWQDFSDQPQPPSTICPNLQ	No	No	Bacteria; Cyanobacteria; UNKNOWN_class; Synechococcales; Synechococcaceae; Synechococcus; Synechococcus sp. PCC 7002
Acr-Aca 1	Low Confidence	Synechococcus sp. PCC 7002	NC_010475.1	WP_012305771.1	131704	131988	-	95	9.5	12.0783	Acr	0.110645051	1880	-5.467599	Not found in Prophage	Not found in Prophage	-	-	MARFNRRTVKRLYRKEPVSSFLIVMGLIEVVIGGVDEHWGLFTIGLGFVLGAIAIRWSRIRRDQRDLNRVLPRRYLPPTEVNVPLPQLMNERQR	No	No	Bacteria; Cyanobacteria; UNKNOWN_class; Synechococcales; Synechococcaceae; Synechococcus; Synechococcus sp. PCC 7002
Acr-Aca 2	Low Confidence	Synechococcus sp. PCC 7002	NC_010475.1	WP_041443551.1	1970481	1970774	+	98	4.5	10.4023	WP_069835851.1\|HTH_3-0-AcrVA5\|43.3\|8.3e-07	0.133942352	472	-4.216162	Not found in Prophage	Not found in Prophage	PHAGE_Entero_WPhi_NC_005056-gi\|33438928\|ref\|NP_878229.1\|\|8.29e-05	-	MHPLDTSNGRFNGMMKTSKPQQTQATVLKQIRETLSLTQFEFAAKTGISLSTIQRAESGQREPNLSYEQWKKFTSIARQAGFDPEKLPDRLSEKVAI	No	No	Bacteria; Cyanobacteria; UNKNOWN_class; Synechococcales; Synechococcaceae; Synechococcus; Synechococcus sp. PCC 7002
Acr-Aca 2	Low Confidence	Synechococcus sp. PCC 7002	NC_010475.1	WP_012307494.1	1970778	1970963	+	62	6	10.8903	Acr	0.188300362	565	-4.390779	Not found in Prophage	Not found in Prophage	-	-	MPNSPNSPWFPTSAMAQALGINPKTLIRNRKRFKEGHHYYNAILLAIGLPTAGTINEFLKP	No	No	Bacteria; Cyanobacteria; UNKNOWN_class; Synechococcales; Synechococcaceae; Synechococcus; Synechococcus sp. PCC 7002
Acr-Aca 2	Low Confidence	Synechococcus sp. PCC 7002	NC_010475.1	WP_012307495.1	1970995	1971381	+	129	-0.5	6.3396	Acr	0.740231452	129	-3.033629	Not found in Prophage	Not found in Prophage	-	-	MTYTIGYTLRSTIDHGSLTEEIKVSSSVTEEKDLPLELEKLRALAFHASHSDRLYEEIKGRTAKAELDLSDSQRALKKMQQEWNKATEFLKAQGLKEAIPNFPIREAHHYENPKKLASTQISGVEMDL	No	No	Bacteria; Cyanobacteria; UNKNOWN_class; Synechococcales; Synechococcaceae; Synechococcus; Synechococcus sp. PCC 7002
Acr-Aca 2	Low Confidence	Synechococcus sp. PCC 7002	NC_010475.1	WP_012307496.1	1971443	1971655	+	71	-3	4.4013	Acr	0.410526227	811	-4.725673	Not found in Prophage	Not found in Prophage	-	-	MTQRWTDEMLDKLADDVQELTESIKTQRDEQKELTIRFNAYQMASQWVVNLAFGLLATATITTIVTAVIK	No	No	Bacteria; Cyanobacteria; UNKNOWN_class; Synechococcales; Synechococcaceae; Synechococcus; Synechococcus sp. PCC 7002
Acr-Aca 3	Low Confidence	Synechococcus sp. PCC 7002	NC_010479.1	WP_012308526.1	14467	14787	-	107	-2	4.8537	WP_079543488.1\|HTH_31\|AcrIIA15\|35.0\|6.9e-05	0.257012682	661	-4.5234346	Not found in Prophage	Not found in Prophage	-	-	MTDNQRIGSSLDGLLEEDGILAEVNALALKRVLAWQLSQEMERQGLSRSQMAASMKTSRSSLQRLLDPENTSVTLKTMEKAAAIVGKRLRIELDDIQESANGLSAS	No	No	Bacteria; Cyanobacteria; UNKNOWN_class; Synechococcales; Synechococcaceae; Synechococcus; Synechococcus sp. PCC 7002
Acr-Aca 3	Low Confidence	Synechococcus sp. PCC 7002	NC_010479.1	WP_012308527.1	14784	15134	-	117	8.5	10.3755	Acr	0.109069128	976	-4.8895025	Not found in Prophage	Not found in Prophage	PHAGE_Shigel_Stx_NC_029120-gi\|985761269\|ref\|YP_009226854.1\|\|2.36e-09	-	MSAKRLSARFYQTESGNEPVRDWLQQLEQSERKIIGADIKTVEYGWPIGMPTCRPMGKGLYEVRSSLPGGKIARVLFCIFEGQMVLLHGFIKKTQKAPQQELNLALKRKSNLEATK	No	No	Bacteria; Cyanobacteria; UNKNOWN_class; Synechococcales; Synechococcaceae; Synechococcus; Synechococcus sp. PCC 7002

Showing 1 to 8 of 8 entries

1.2 Guilt-by-Association (Graphic View)

Download SVG PNG

1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

Show entries

Search:

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_000019485.1	NC_010475	NC_010475_1[1864677;1865652] (evidence-level=4),	1	Nb_arrays_evidence-level_1=0,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=1	CAS-TypeIA[1855750;1864421],	1	CAS-TypeIA (n=1),
GCF_000019485.1	NC_010478	NC_010478_1[12085;15035] (evidence-level=4),	1	Nb_arrays_evidence-level_1=0,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=1	CAS-TypeID[15538;24814], CAS[15248;24814],	2	CAS (n=1), CAS-TypeID (n=1),
GCF_000019485.1	NC_010480	NC_010480_1[54528;61299] (evidence-level=4),	1	Nb_arrays_evidence-level_1=0,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=1	CAS-TypeIIIB[44557;62742],	1	CAS-TypeIIIB (n=1),

Showing 1 to 3 of 3 entries