Results - Acr-Aca DB

Anti-CRISPR Results - GCF_000069945.1 (Total 2 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

Show entries

Search:

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Corynebacterium urealyticum DSM 7109	NC_010545.1	WP_041628463.1	681757	682119	-	121	-6	4.3006	Acr	0.234546736	542	-4.9117093	Not found in Prophage	Not found in Prophage	-	-	MRILTAVLLALLALAVATALSLYYVKTKSDDLDLERAKAACIEDVEKRAKYPGGVTFPDDGPKPATANDWLDSPRTYTAEGVVDFPNGFGTPVRMEYACTADIYSDGEVESSSAQVWKQY	No	No	Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium urealyticum
Acr-Aca 1	Low Confidence	Corynebacterium urealyticum DSM 7109	NC_010545.1	WP_012359821.1	682232	682663	-	144	-9	4.4554	AcrIE4-IF7-1-WP_027405498.1\|HTH_28\|40.5\|0.0024	0.159294631	230	-4.1773853	Not found in Prophage	Not found in Prophage	PHAGE_Rhodoc_REQ2_NC_016652-gi\|372449861\|ref\|YP_005087084.1\|\|1.05e-20	-	MDIKQWLSEAAKRPIYDQDIANVLGVTRKTANKRLNAQLDAGDLITICRALDVNPVIALVELDYITHAEVTNYLDSDGALVATAEPGYLALELARKLNPATHAPLIDELEARSATPHLHAVADFSPDEDALRNPHHDDPFDTP	No	No	Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium urealyticum
Acr-Aca 2	Low Confidence	Corynebacterium urealyticum DSM 7109	NC_010545.1	WP_012360649.1	1653379	1653597	+	73	1	8.7168	AcrIIA7-0-WP_106317108.1\|HTH_DeoR\|42.5\|0.00054	0.363404739	451	-4.7668986	Not found in Prophage	Not found in Prophage	PHAGE_Gordon_GRU3_NC_030935-gi\|100020\|ref\|YP_009276113.1\|\|3.32e-07	-	MREILTTSEVAELLGIGLSTVTWRARQGRLPVLQQISGRGTYLFDGETIRKMADRAGRENTTDQAPQTEPPK	No	No	Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium urealyticum
Acr-Aca 2	Low Confidence	Corynebacterium urealyticum DSM 7109	NC_010545.1	WP_012360650.1	1653594	1654040	+	149	-11	4.2419	Acr	0.388666552	21	-2.1861374	Not found in Prophage	Not found in Prophage	-	-	MTQEFSRRITLPYMDMTKTYPWTRIEPQDIEISLEAAFDDPDDEAPLLIRAHVLNEIKVKTLNRDNLPRLCTAIFRAANAALFFTEPYEEPRPGVELTPFRTEPTGTDQDTYFRILVDLGDPFDEDRSRHLPCLIYIPTPEGATNDNP	No	No	Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium urealyticum
Acr-Aca 2	Low Confidence	Corynebacterium urealyticum DSM 7109	NC_010545.1	WP_012360651.1	1654027	1654449	+	141	2	8.5901	Acr	0.24710349	1603	-5.802201	Not found in Prophage	Not found in Prophage	-	-	MTIPNPSAVLALLQGGPFTDLTPEKITAGWRANLTNTQITVLIDGTVQLPDTSAELVSWLALAIAAAVREDKTPGIVNRPPLKKVTSRRLPAGHGATDAITRYEYRFVEVSESPSTAQAKVHRTIIVTLAVEQVTPGAQP	No	No	Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium urealyticum
Acr-Aca 2	Low Confidence	Corynebacterium urealyticum DSM 7109	NC_010545.1	WP_012360652.1	1654446	1654856	+	137	0	6.4799	Acr	0.3431316	305	-4.396922	Not found in Prophage	Not found in Prophage	-	-	MTTSANHHLMIPANHPAGSKSYEVNAYEINASYGLVLTIWFTRERFPDDTDPEMLKELAVFLSREVKDRIASKWADRVPANVRLVPESDPLAGRNQRVVRITEHAPGRYPSPGEPCNCIQVIFDNQTTATTKETQP	No	No	Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium urealyticum
Acr-Aca 2	Low Confidence	Corynebacterium urealyticum DSM 7109	NC_010545.1	WP_012360653.1	1654853	1655302	+	150	-4.5	4.8431	Acr	0.759393719	254	-4.2674603	Not found in Prophage	Not found in Prophage	-	-	MTTTLNRPALSAESAREQAYTQSASDWIDHADTFRRLAAVAFERAQGEDDSYCRRMDEDLAIAYTSAYIACTQKGMAMQTPVDTERSVHRLPPSVTELLLDYAQGRDIDPRDTELLRQNALVEYGTDRITREGMRIVAHWRGEISFPRA	No	No	Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium urealyticum
Acr-Aca 2	Low Confidence	Corynebacterium urealyticum DSM 7109	NC_010545.1	WP_012360654.1	1655302	1655607	+	102	5.5	9.72	Acr	0.534304716	110	-3.5822453	Not found in Prophage	Not found in Prophage	-	-	MRTRQLRIPSGRLITVVIDGQQLTHVAYGDLCQNLPASWRDSLPHHQRRPMFYRIFAEVSDLKQLTTTDRIDKKARNALEELLDNLHKILNEQTHDQQEKK	No	No	Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium urealyticum
Acr-Aca 2	Low Confidence	Corynebacterium urealyticum DSM 7109	NC_010545.1	WP_012360655.1	1655604	1655867	+	88	-0.5	5.7207	Acr	0.204577458	1324	-5.646979	Not found in Prophage	Not found in Prophage	-	-	MTTTTHLERTPIPQARRAQRQCMPLPLAAPAPAPAPAAQIDRQEQDDAEQARLPEWADYLVILLLAVVAIQIAILVVFNVLRALWLW	No	No	Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium urealyticum

Showing 1 to 9 of 9 entries

1.2 Guilt-by-Association (Graphic View)

Download SVG PNG

1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

Show entries

Search:

GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_000069945.1	NC_010545	NC_010545_1[1079472;1079591] (evidence-level=1), NC_010545_2[1079673;1079758] (evidence-level=1), NC_010545_3[1519463;1519546] (evidence-level=1), NC_010545_4[1810396;1810493] (evidence-level=1), NC_010545_5[2257907;2257999] (evidence-level=1), NC_010545_6[2285224;2285369] (evidence-level=1), NC_010545_7[2288189;2292426] (evidence-level=4),	7	Nb_arrays_evidence-level_1=6,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=1	CAS-TypeIE[2292843;2301736],	1	CAS-TypeIE (n=1),

Showing 1 to 1 of 1 entries