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Anti-CRISPRDB (2018)
CRISPRCasFinder (2018)
Tracking Anti-CRISPR Names (2018)
Self-Targeting-Spacer-Searcher (2018)
CRISPRminer (2018)
AcRanker (2020)
AcrFinder (2020)
PaCRISPR (2020)
AcrCatalog (2020)
AcrDetector (2020)
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Results
Anti-CRISPR Results -
GCF_000234805.1
(Total 1 loci with Aca homologs)
1. Guilt-by-Association
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1.1 Guilt-by-Association (Tabular View)
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aa Length
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AcRanker Score
AcRanker Rank Prophage
AcRanker Score Prophage
MGE/Propahge Metadata
Acr_Hit
sequence
Self Target w/in 5000 BP
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lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Loci ID
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Refseq ID
Protein ID
Start
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aa Length
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Acr/Aca
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AcRanker Score Prophage
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Acr_Hit
sequence
Self Target w/in 5000 BP
Self Target Outside 5000 BP
lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1
Low Confidence
Pyrobaculum ferrireducens
NC_016645.1
WP_014289931.1
2283130
2283468
+
113
-2
5.2172
WP_144761862.1|HTH_3|AcrIIA15|60.0|0.0016
0.157290697
366
-4.138328
Not found in Prophage
Not found in Prophage
-
-
MSLGLYRRLWERRAEELRNLWATLERLKARARELDPGAQVYVFGSFAKGTHRPDSDVDVLVVTSLAETEEGRLYVRAELGRILSPYSPIELHIATPEQFAWYLQFLDVYVEV
No
No
Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum; Pyrobaculum ferrireducens
Acr-Aca 1
Low Confidence
Pyrobaculum ferrireducens
NC_016645.1
WP_014289932.1
2283530
2283919
+
130
1
7.2055
Acr
0.297691486
211
-3.5748582
Not found in Prophage
Not found in Prophage
-
-
MDISEIIGTVAKSVDPIAVIQALAKEKKLDKDDIQILLLTSILEHLKTMNTKLENLASKVGNMETELKNLRNEVAALREDVRNMHRDLRDRLDLISNQLRVLNTNIASTYELTSKVVSVLMSKGLPVAP
No
No
Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum; Pyrobaculum ferrireducens
Showing 1 to 2 of 2 entries
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1.2 Guilt-by-Association (Graphic View)
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GCF_000234805.1 NC_016645.1 GBA Results Overview
Start/End point:0/2467972
NC_016645.1 Acr-Aca 1
Aca:WP_014289931.1
Acr:WP_014289932.1
2283130
2283330
2283530
2283730
Acr-Aca 1: 2283130-2283919 (+)
1.3 Guilt-by-Association (Jbrowse View)
2. Homology Based
No result on Homology Based method
3. CRISPRCasFinder Summary
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GCF
NC_ID
CRISPR arrays
Nb CRISPRs
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Nb Cas
Cas Types/ Subtyes
GCF
NC_ID
CRISPR arrays
Nb CRISPRs
Evidence levels
Cas clusters
Nb Cas
Cas Types/ Subtyes
GCF_000234805.1
NC_016645
NC_016645_1[277565;278749] (evidence-level=4), NC_016645_2[761756;762866] (evidence-level=4), NC_016645_3[766999;768371] (evidence-level=4), NC_016645_4[784073;784171] (evidence-level=1), NC_016645_5[795088;798822] (evidence-level=4), NC_016645_6[837468;839153] (evidence-level=4), NC_016645_7[845780;848206] (evidence-level=4), NC_016645_8[852183;853584] (evidence-level=4), NC_016645_9[2235098;2235868] (evidence-level=4),
9
Nb_arrays_evidence-level_1=1,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=8
CAS-TypeIIIB[742170;751832], CAS-TypeIA[799744;808197],
2
CAS-TypeIA (n=1), CAS-TypeIIIB (n=1),
Showing 1 to 1 of 1 entries
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