Results - Acr-Aca DB

Anti-CRISPR Results - GCF_000252855.1 (Total 7 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Medium Confidence	Riemerella anatipestifer ATCC 11845 = DSM 15868	NC_017045.1	WP_013447208.1	2229	2570	+	114	5.5	9.9777	Acr	0.143719516	104	-2.0313952	Not found in Prophage	Not found in Prophage	PHAGE_Shigel_Stx_NC_029120-gi\|985761269\|ref\|YP_009226854.1\|\|7.86e-05	-	METIRQVIAYKKYFLDFYQAQTDEVQRKIEWTLNLLRTIDRVPKKYFDHITGTDGLFEVRVELGGNIFRIFAFFDKGNLVVLGNGFQKKSQKTPKNEIEKAIKIKAEYENERK	No		Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella; Riemerella anatipestifer
Acr-Aca 1	Medium Confidence	Riemerella anatipestifer ATCC 11845 = DSM 15868	NC_017045.1	WP_004917541.1	2551	2856	+	102	0.5	6.9846	AcrIIA1-3-WP_029164158.1\|HTH_3\|50.5\|2.6e-24	0.115406411	142	-2.347685	Not found in Prophage	Not found in Prophage	PHAGE_Sulfit_pCB2047_A_NC_020858-gi\|472341910\|ref\|YP_007675423.1\|\|7.01e-04	-	MKTKENNITTLDEILDNKYGKRGAKEREQWEQEFESFQLGVLLEEARRKLGMTQEELAEKCGTNKSYISRIENNASDIRLSTLMKIIQTGLGGHLKLTLQL	No		Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella; Riemerella anatipestifer
Acr-Aca 2	Medium Confidence	Riemerella anatipestifer ATCC 11845 = DSM 15868	NC_017045.1	WP_004917808.1	97709	97891	-	61	5	10.2976	WP_082970537.1\|HTH_XRE\|AcrIIA1\|31.7\|0.00021	0.59616721	115	-2.1831813	16	-2.1831813	PHAGE_Riemer_RAP44_NC_019490-gi\|418489853\|ref\|YP_007003675.1\|\|8.66e-37	-	MNEVEKLILISRKSAKELAPILNTSETQISRYKKGKTEITVALLKKWCEILQIDIKKLFN	No		Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella; Riemerella anatipestifer
Acr-Aca 2	Medium Confidence	Riemerella anatipestifer ATCC 11845 = DSM 15868	NC_017045.1	WP_004917809.1	97891	98232	-	114	-6	4.4697	Acr	0.811793171	162	-2.4478655	22	-2.4478655	PHAGE_Riemer_RAP44_NC_019490-gi\|418489852\|ref\|YP_007003676.1\|\|4.77e-81	-	MSYFLSHKTPEFLLAELPIKDGSPNDDRLWVYCVKALSLIEFINLNQIKAHGLRLADEKTYKNERWGIAFVQNNCEYLGLDESEVIKNAWKFLTDYFDWEDKNIDESSTSTLN	No		Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella; Riemerella anatipestifer
Acr-Aca 3	Medium Confidence	Riemerella anatipestifer ATCC 11845 = DSM 15868	NC_017045.1	WP_004917814.1	99531	99809	+	93	2	9.5169	ERS698714\|NODE_1166_length_747_cov_2.005780_1\|HTH_XRE-0-AcrIIA1\|35.6\|6.2e-08	0.133561579	1593	-5.2543745	153	-5.2543745	PHAGE_Riemer_RAP44_NC_019490-gi\|418489929\|ref\|YP_007003678.1\|\|3.62e-59	-	MIVKQILKDKGMTAKELAESIGMSETGLSIALSEKGNPSLSTLKKIAEILNVSLAELFGGNGGGIMGFVEYKGIIYKIKSFEDLQKILDLRK	No		Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella; Riemerella anatipestifer
Acr-Aca 3	Medium Confidence	Riemerella anatipestifer ATCC 11845 = DSM 15868	NC_017045.1	WP_004917816.1	99831	100178	+	116	-9	4.2518	Acr	0.942099684	8	0.074061096	1	0.074061096	PHAGE_Riemer_RAP44_NC_019490-gi\|418489850\|ref\|YP_007003599.1\|\|1.26e-80	-	MKDLDLSKLKGEEIAQWLLNNKKATAIQLSSERTDTDDGFMHILVHKDEYVEIIYSYLKIDEDDVMQNFTIYSKRWGNIDNSYFELQTFEGEIFTGESDKILCGVLSLGDLTTLK	No		Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella; Riemerella anatipestifer
Acr-Aca 4	Medium Confidence	Riemerella anatipestifer ATCC 11845 = DSM 15868	NC_017045.1	WP_004917868.1	121307	121573	+	89	4.5	10.0615	3300014205_____Ga0172380_10007072_4\|HTH_AraC\|AcrIIA14\|35.7\|0.00064	0.357761308	21	-0.84745395	3	-0.84745395	PHAGE_Riemer_RAP44_NC_019490-gi\|418489891\|ref\|YP_007003625.1\|\|2.69e-58	-	MNEILHKRIADMTTFEMMESAYLIEKARSITMSIDDFAKTMGVDNRKVYKLLKGKILPEEIIRGGYDSLRQRKRPIFITEEVLKWIKN	No		Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella; Riemerella anatipestifer
Acr-Aca 4	Medium Confidence	Riemerella anatipestifer ATCC 11845 = DSM 15868	NC_017045.1	WP_014411188.1	121616	121816	+	67	2	8.0244	Acr	0.565869738	183	-2.5801814	25	-2.5801814	PHAGE_Riemer_RAP44_NC_019490-gi\|418489892\|ref\|YP_007003626.1\|\|5.74e-16	-	MQKGFTFTNYGSHNLYELSRDGHDYCVNLQGEVMTTNESKTKDLKVDIPIPKNKAEAERWFKKILG	No		Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella; Riemerella anatipestifer
Acr-Aca 5	Medium Confidence	Riemerella anatipestifer ATCC 11845 = DSM 15868	NC_017045.1	WP_004918017.1	163115	163549	-	145	5	8.4859	WP_111570635.1\|HTH_24-0-AcrIIA15\|32.9\|7.6e-07	0.148483686	656	-3.9993205	Not found in Prophage	Not found in Prophage	-	-	MFSKACEYAIRSAICIAQKRLNNQRVNVKEISASIDAPVAFIAKILQQLCKANIIESVRGHQGGFSIDIEQLKEIKIYDIIVAIDGSGLFTKCGLGLKECSSVNPCPVHNDFREIKAKLENITKSYSLYDLALKTEQGLAWLKI	No		Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella; Riemerella anatipestifer
Acr-Aca 5	Medium Confidence	Riemerella anatipestifer ATCC 11845 = DSM 15868	NC_017045.1	WP_004918018.1	163561	163938	-	126	-1.5	5.523	Acr	0.441505174	1414	-5.0590324	Not found in Prophage	Not found in Prophage	-	-	MEDRNYFNDEPKKTNSFYIAIGILAIFTLMGLGIDIDEFSQHESINIPTWYFYLIFGVDLLALVGLFLIVLFRKIGVFLFPLAVIAHFILHQFYLSTFLYTDVTNLFLYVGLGLLMIIPKWQYFK	No		Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella; Riemerella anatipestifer

Showing 1 to 10 of 15 entries

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

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GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_000252855.1	NC_017045	NC_017045_1[1020412;1021382] (evidence-level=4), NC_017045_2[1855428;1856792] (evidence-level=4), NC_017045_3[1991207;1991466] (evidence-level=1),	3	Nb_arrays_evidence-level_1=1,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2	CAS-TypeIIU[1021490;1026931],	1	CAS-TypeIIU (n=1),

Showing 1 to 1 of 1 entries