Results - Acr-Aca DB

Anti-CRISPR Results - GCF_000819445.1 (Total 3 loci with Aca homologs)

1. Guilt-by-Association

1.1 Guilt-by-Association (Tabular View)

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Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)

Loci ID	Classification	Organism	Refseq ID	Protein ID	Start	End	Strand	aa Length	Charge	Isoelectric Point	Acr/Aca	PaCRISPR_score	AcRanker Rank	AcRanker Score	AcRanker Rank Prophage	AcRanker Score Prophage	MGE/Propahge Metadata	Acr_Hit	sequence	Self Target w/in 5000 BP	Self Target Outside 5000 BP	lineage(Kingdom;Phylum;Class;Order;Family;Genus;Species;SubSpecies)
Acr-Aca 1	Low Confidence	Corynebacterium humireducens NBRC 106098 = DSM 45392	NZ_CP005286.1	WP_040085224.1	700665	701051	-	129	4	8.5414	AcrID1-2-AcrID1-0-REF:2706796521_____2706858827_47\|HTH_29\|35.4\|0.0073	0.331500893	49	-2.7051432	2	-2.7051432	PHAGE_Gordon_Sour_NC_042132-gi\|100071\|ref\|YP_009625641.1\|\|1.45e-13	-	MESWMPDDHVTEAVLDGRRDYRQLSMPDSRWVVAELTHRGYSVREIAGWLKCSTRQVKRVRAELLTEVMGLLAEERERAAQAERRFANVRRDNSRLVERCAELETRNDIHVMATLSQLGTGKRSSAPH	No	No	Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium humireducens
Acr-Aca 1	Low Confidence	Corynebacterium humireducens NBRC 106098 = DSM 45392	NZ_CP005286.1	WP_040085225.1	701032	701487	-	152	-2	5.3417	Acr	0.069716499	1126	-5.3966165	84	-5.3966165	PHAGE_Mycoba_ShiVal_NC_028674-gi\|966199200\|ref\|YP_009189306.1\|\|7.67e-13	-	MARRPDPVRAAALAERRKRVLQARLEGRSFRAIADAEELSVSTVHDDYTRALGDIPRAEADSLRKVEGARLDALQAAVWEKAMLGNLDAGHQVLRIIDRRCRLFGLDAPQQVELSAGDVDLDATVAKVLEAAQAAVRVKDGEEGSSGVVDA	No	No	Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium humireducens
Acr-Aca 1	Low Confidence	Corynebacterium humireducens NBRC 106098 = DSM 45392	NZ_CP005286.1	WP_040085226.1	701487	701882	-	132	11.5	10.2764	Acr	0.086582832	1070	-5.3654575	82	-5.3654575	PHAGE_Mycoba_Tortellini_NC_041888-gi\|100060\|ref\|YP_009596644.1\|\|1.72e-34	-	MTEHKTTEHTLHLPHTTPPLHANQRHHWAVRAKLTRQLRDDTHILARAAKLPQGCSFATVTLHYLPTTRRRRDRHNLYPTVKACIDGLVDYGLVPDDSAVFVSAPEPVIHPANRSPRRSRLWLEIETKEVA	No	No	Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium humireducens
Acr-Aca 2	Low Confidence	Corynebacterium humireducens NBRC 106098 = DSM 45392	NZ_CP005286.1	WP_040085229.1	705315	705623	-	103	-1	5.1212	WP_114738530.1\|HTH_28\|AcrIIA14\|31.0\|1.8e-06	0.112183568	51	-2.7234411	3	-2.7234411	PHAGE_Vibrio_X29_NC_024369-gi\|658311193\|ref\|YP_009043897.1\|\|2.35e-05	-	MNTTDLITAAITAAVREAVREEVSQLVDQLKAPNPSPVDGPEFLSTLQVAEITGINENTLRRWRSDDDPAGPPYVRFGRAVRYRRSDIDQWANSPFSTRGRP	No	No	Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium humireducens
Acr-Aca 2	Low Confidence	Corynebacterium humireducens NBRC 106098 = DSM 45392	NZ_CP005286.1	WP_082028353.1	705620	705949	-	110	9	11.5575	SRS2563917\|NODE_53088_length_532_cov_1.834382_1\|HTH_37\|AcrIIA15\|38.9\|5.8e-05	0.238345672	282	-4.304975	18	-4.304975	PHAGE_Gordon_GMA1_NC_030902-gi\|100035\|ref\|YP_009273257.1\|\|1.23e-10	-	MDVIFEHCRSHHLAPHSRTHWLTFAFLRFSVRPMTPPHTPRRPWVEAQTFLDRDGMTQTTLARETGFSVSYINDLIRGRRSPNGRVISRVAAVLKVPKSMLIPATEDAA	No	No	Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium humireducens
Acr-Aca 3	Low Confidence	Corynebacterium humireducens NBRC 106098 = DSM 45392	NZ_CP005286.1	WP_082028425.1	1916124	1916573	+	150	7.5	8.7583	AcrVA5-2-WP_087920907.1\|HTH_Tnp_1\|37.1\|9.7e-17	0.141725321	602	-4.9040384	Not found in Prophage	Not found in Prophage	PROPHAGE_Lactoc_Il1403-gi\|15674055\|ref\|NP_268230.1\|\|2.60e-27	-	MYLATVIDCFSRRLVGFAIADHMRTSLVQDALIMAKGQRGSLKDAVFHSDHGSVYTSHAFQDTCTQLGIRQSMGAIGSSADNALAESFNAALKREVLQDAKTFANQLACRRDVFRWCTRYNTVRRHSWCRYLAPAVFEEQCPVMLRSAS	No	No	Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium humireducens
Acr-Aca 3	Low Confidence	Corynebacterium humireducens NBRC 106098 = DSM 45392	NZ_CP005286.1	WP_040086350.1	1916694	1916876	+	61	-3.5	4.3612	Acr	0.336912767	161	-3.7425742	Not found in Prophage	Not found in Prophage	PHAGE_Gordon_Vivi2_NC_031239-gi\|100044\|ref\|YP_009301968.1\|\|1.07e-09	-	MFFAVDFDITLTQWSFVASENFRATCRMLGRDRMEIYDHSRVCDWAREDAMIADLGGANS	No	No	Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium humireducens
Acr-Aca 3	Low Confidence	Corynebacterium humireducens NBRC 106098 = DSM 45392	NZ_CP005286.1	WP_040086351.1	1916876	1917469	+	198	3	7.1579	Acr	0.064317576	174	-3.7973342	Not found in Prophage	Not found in Prophage	PHAGE_Mycoba_TM4_NC_003387-gi\|18496914\|ref\|NP_569764.1\|\|1.97e-08	-	MMHHTGGSTPDRTSPGYVADSPDVGASIAYHAGLADPGCSGAAGQGYPTRPSTTGPKLYTSGDARYIGIEPQNSGREPWEPELYDAFVRSAAAVLCYKGLSADRAHLPSRKEYAPSRKVDPNLNMDAFRRTVQHLIDRVHFEPTHKFQSRYVNANGVRPEHYETLMGYILNNRKIEDLRAITTGPTPTADAACEGAG	No	No	Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium humireducens

Showing 1 to 8 of 8 entries

1.2 Guilt-by-Association (Graphic View)

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1.3 Guilt-by-Association (Jbrowse View)

2. Homology Based

No result on Homology Based method

3. CRISPRCasFinder Summary

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GCF	NC_ID	CRISPR arrays	Nb CRISPRs	Evidence levels	Cas clusters	Nb Cas	Cas Types/ Subtyes
GCF_000819445.1	NZ_CP005286	NZ_CP005286_1[414827;414931] (evidence-level=1), NZ_CP005286_2[2440550;2440700] (evidence-level=1), NZ_CP005286_3[2442024;2445289] (evidence-level=4), NZ_CP005286_4[2447905;2457449] (evidence-level=4),	4	Nb_arrays_evidence-level_1=2,Nb_arrays_evidence-level_2=0,Nb_arrays_evidence-level_3=0,Nb_arrays_evidence-level_4=2	CAS-TypeIE[2457517;2466510],	1	CAS-TypeIE (n=1),

Showing 1 to 1 of 1 entries